Results 1-50 of 139 for Genomics

Fast and Simple micro-RNA Northern Blots 1185 Views

Fast and Simple micro-RNA Northern Blots Nham Tran1,21The Sydney Head and Neck Cancer Institute, Sydney Cancer Centre, Royal Prince Alfred Hospital and University of Sydney, Sydney, NSW 2006, Australi...

http://test1.la-press.com/fast-and-simple-micro-rna-northern-blots-a1344

Genomic and Proteomic Biomarker Discovery in Neurological Disease 1611 Views

RiLee H. Robeson1, Andrew M. Siegel1 and Travis Dunckley1 1Neurogenomics Division, Translational Genomics Research Institute, Phoenix, Arizona 85004. Abstract Technology for high-throughout scann...

http://test1.la-press.com/genomic-and-proteomic-biomarker-discovery-in-neurological-disease-a522

Time Dependent Gene Expression Changes in the Liver of Mice Treated with Benzene 1125 Views

Han-Jin Park1, Jung Hwa Oh1, Seokjoo Yoon1 and S.V.S. Rana2 1Korea Institute of Toxicology, 100-Jang-Dong, Yuseong-Gu, Daejeon-305-600, Korea. 2Toxicology Laboratory, Department of Zoology, Ch. Chara...

http://test1.la-press.com/time-dependent-gene-expression-changes-in-the-liver-of-mice-treated-wi-a670

DICER1 and PRKRA in Colon Adenocarcinoma 1159 Views

S. Chiosea, M. Acquafondata, J. Luo, SF. Kuan, RR. Seethala Department of Pathology, University of Pittsburgh Medical Center, Pittsburgh, PA, U.S.A. Abstract Differential microRNA expression in col...

http://test1.la-press.com/dicer1-and-prkra-in-colon-adenocarcinoma-a751

Tracking Differential Gene Expression in MRL/MpJ Versus C57BL/6 Anergic B Cells: Molecular Markers of Autoimmunity 1182 Views

Amy G. Clark, Katherine M. Mackin and Mary H. Foster Departments of Medicine and Research Service, Duke University and Durham Veterans Affairs Medical Centers, Durham, North Carolina, U.S.A. Abstrac...

http://test1.la-press.com/tracking-differential-gene-expression-in-mrlmpj-versus-c57bl6-anergic--a853

Hematopoietic Lineage Transcriptome Stability and Representation in PAXgeneTM Collected Peripheral Blood Utilising SPIA Single-Stranded cDNA Probes for Microarray 1195 Views

Laura Kennedy1, J. Keith Vass1, D. Ross Haggart1, Steve Moore1, Michael E. Burczynski2, Dan Crowther1 and Gino Miele1 1Translational Medicine Research Collaboration Laboratory, Sir James Black Centre...

http://test1.la-press.com/hematopoietic-lineage-transcriptome-stability-and-representation-in-pa-a963

Gene Expression Profiles from Needle Biopsies Provide Useful Signatures of Non-Small Cell Lung Carcinomas 1354 Views

Douglas E. Paull1, Kevin Kelley2, Jazbieh Moezzi3, Madhavi Kadakia2,4, and Steven J. Berberich2,4 Departments of 1Surgery, 2Biochemistry & Molecular Biology, 3Pathology, and the 4Center of Genomics Re...

http://test1.la-press.com/gene-expression-profiles-from-needle-biopsies-provide-useful-signature-a271

Gene Expression in Hair Follicle Dermal Papilla Cells after Treatment with Stanozolol 1706 Views

Gene Expression in Hair Follicle Dermal Papilla Cells after Treatment with Stanozolol M. Reiter1, M.W. Pfaffl1, M. Schönfelder2 and H.H.D. Meyer11Physiology Weihenstephan Technische Universität Mün...

http://test1.la-press.com/gene-expression-in-hair-follicle-dermal-papilla-cells-after-treatment--a1253

Analysis of Gene Expression Data Using BRB-Array Tools 2391 Views

Richard Simon1, Amy Lam2, Ming-Chung Li2, Michael Ngan2, Supriya Menenzes2 and Yingdong Zhao11Biometric Research Branch, National Cancer Institute, 9000 Rockville Pike, Bethesda MD.2Emmes Corporation,...

http://test1.la-press.com/analysis-of-gene-expression-data-using-brb-array-tools-a43

Feature Selection for Predicting Tumor Metastases in Microarray Experiments using Paired Design 1938 Views

Qihua Tan1,2, Mads Thomassen1 and Torben A. Kruse1 1Department of Biochemistry, Pharmacology and Genetics, Odense University Hospital, Odense, Denmark. 2Department of epidemiology, Institute of Public...

http://test1.la-press.com/feature-selection-for-predicting-tumor-metastases-in-microarray-experi-a194

Germinal Center B Cell-Like (GCB) and Activated B Cell-Like (ABC) Type of Diffuse Large B Cell Lymphoma (DLBCL): Analysis of Molecular Predictors, Signatures, Cell Cycle State and Patient Survival 1587 Views

S. Blenk1, J. Engelmann1, M. Weniger1, J. Schultz1, M. Dittrich1, A. Rosenwald2, H.K. Müller-Hermelink2, T. Müller1 and T. Dandekar1 1Department of Bioinformatics, University of Würzbu...

http://test1.la-press.com/germinal-center-b-cell-like-gcb-and-activated-b-cell-like-abc-type-of--a470

A Practical Multifaceted Approach to Selecting Differentially Expressed Genes 1224 Views

Yingye Zheng1 and Margaret Pepe1,2 1Fred Hutchinson Cancer Research Center, 1100 Fairview Avenue N., M2-B232 Seattle, WA 98109. 2Department of Biostatistics, University of Washington, Box 357232 ...

http://test1.la-press.com/a-practical-multifaceted-approach-to-selecting-differentially-expresse-a486

Estimating the False Discovery Rate Using Mixed Normal Distribution for Identifying Differentially Expressed Genes in Microarray Data Analysis 1403 Views

Akihiro Hirakawa1, Yasunori Sato1, Takashi Sozu2, Chikuma Hamada3, Isao Yoshimura3 1Genetics Division, National Cancer Center Research Institute, Chuo-ku, Tokyo, Japan. 2The Center for Advanced Medi...

http://test1.la-press.com/estimating-the-false-discovery-rate-using-mixed-normal-distribution-fo-a495

Exploratory Visual Analysis of Statistical Results from Microarray Experiments Comparing High and Low Grade Glioma 2058 Views

David M. Reif1, Mark A. Israel2 and Jason H. Moore3 1Graduate Student, Computational Genetics Laboratory, Dartmouth-Hitchcock Medical Center, Lebanon, NH 03756. 2Professor of Pediatrics and Genetics, ...

http://test1.la-press.com/exploratory-visual-analysis-of-statistical-results-from-microarray-exp-a206

Application of Gene Shaving and Mixture Models to Cluster Microarray Gene Expression Data 1626 Views

K-A. Do1, G.J. McLachlan2, R. Bean2 and S. Wen1 1University of Texas, M.D. Anderson Cancer Center, Houston, Texas, U.S.A. 2Department of Mathematics & Institute for Molecular Bioscience, Universit...

http://test1.la-press.com/application-of-gene-shaving-and-mixture-models-to-cluster-microarray-g-a207

A Hybrid Approach for Biomarker Discovery from Microarray Gene Expression Data for Cancer Classification 1501 Views

Yanxiong Peng1,2, Wenyuan Li1,2 and Ying Liu1,2,3 1Laboratory for Bioinformatics and Medical Informatics, 2Department of Computer Science, 3Department of Molecular and Cell Biology, University of Texa...

http://test1.la-press.com/a-hybrid-approach-for-biomarker-discovery-from-microarray-gene-express-a95

Integrative Analysis of Gene Expression Data Including an Assessment of Pathway Enrichment for Predicting Prostate Cancer 1376 Views

Pingzhao Hu1, Celia M.T. Greenwood1,2 and Joseph Beyene2,3 1Program in Genetics and Genomic Biology, The Hospital for Sick Children Research Institute, 15–706 TMDT, 101 College Street, Toronto, ...

http://test1.la-press.com/integrative-analysis-of-gene-expression-data-including-an-assessment-o-a97

Construction and Clarification of Dynamic Gene Regulatory Network of Cancer Cell Cycle via Microarray Data 1450 Views

Cheng-Wei Li, Yung-Hsiang Chu and Bor-Sen ChenLab. of Systems biology, National Tsing Hua University, Hsinchu, 300, Taiwan.AbstractBackground: Cell cycle is an important clue to unravel the mechanism ...

http://test1.la-press.com/construction-and-clarification-of-dynamic-gene-regulatory-network-of-c-a100

On the Number of Close-to-Optimal Feature Sets 998 Views

Edward R. Dougherty1,2 and Marcel Brun21Department of Electrical and Computer Engineering, Texas A & M University, College Station, TX. 2Computational Biology Division, Translational Genomics Rese...

http://test1.la-press.com/on-the-number-of-close-to-optimal-feature-sets-a102

aCGHViewer: A Generic Visualization Tool For aCGH data 2064 Views

Ganesh Shankar1, Michael R. Rossi1, Devin E. McQuaid1, Jeffrey M. Conroy1, Daniel G. Gaile2, John K. Cowell1, Norma J. Nowak1, Ping Liang11Department of Cancer Genetics, Roswell Park Cancer Institute,...

http://test1.la-press.com/acghviewer-a-generic-visualization-tool-for-acgh-data-a114

Evaluating Microarray-based Classifiers: An Overview 1362 Views

A.-L. Boulesteix1, C. Strobl2, T. Augustin2 and M. Daumer1 1Sylvia Lawry Centre for MS Research (SLC), Hohenlindenerstr. 1, 81677 Munich, Germany. 2Department of Statistics, University of Munich (LM...

http://test1.la-press.com/evaluating-microarray-based-classifiers-an-overview-a577

Chromosome 20q Amplification Regulates in Vitro Response to Kinesin-5 Inhibitor 1349 Views

Aimee L. Jackson*1, Mao Mao*1, Sumire Kobayashi1, Teresa Ward1, Matthew Biery1, Hongyue Dai1, Steven R. Bartz2 and Peter S. Linsley1 1Rosetta Inpharmatics LLC, a wholly-owned subsidiary of Merck and ...

http://test1.la-press.com/chromosome-20q-amplification-regulates-in-vitro-response-to-kinesin-5--a650

Chromosome 20q Amplification Regulates in Vitro Response to Kinesin-5 Inhibitor 1349 Views

Aimee L. Jackson*1, Mao Mao*1, Sumire Kobayashi1, Teresa Ward1, Matthew Biery1, Hongyue Dai1, Steven R. Bartz2 and Peter S. Linsley1 1Rosetta Inpharmatics LLC, a wholly-owned subsidiary of Merck and ...

http://test1.la-press.com/chromosome-20q-amplification-regulates-in-vitro-response-to-kinesin-5--a650

DNA Copy Number Analysis in Gastrointestinal Stromal Tumors Using Gene Expression Microarrays 1522 Views

Cristina R. Antonescu1, Kai Wu2, Guoliang Leon Xing3, Manqiu Cao2, Yaron Turpaz4, Margaret A. Leversha5, Earl Hubbell3, Robert G. Maki6, C. Garrett Miyada7, and Raji Pillai8 1Department of Pathology,...

http://test1.la-press.com/dna-copy-number-analysis-in-gastrointestinal-stromal-tumors-using-gene-a662

MCAM: A Database to Accelerate the Identification of Functional Cell Adhesion Molecules 1315 Views

Anguraj Sadanandam1, Sudipendra Nath Pal2, Joe Ziskovsky2, Prathibha Hegde2 and Rakesh K. Singh1 1Department of Pathology and Microbiology, 2Information Technology Services Learning Environment/Inter...

http://test1.la-press.com/mcam-a-database-to-accelerate-the-identification-of-functional-cell-ad-a676

Non-Negative Matrix Factorization for the Analysis of Complex Gene Expression Data: Identification of Clinically Relevant Tumor Subtypes 1339 Views

Attila Frigyesi1,2 and Mattias Höglund3 1Department of Cardiology, Lund University Hospital, SE-221 85 Lund, Sweden. 2Centre for Mathematical Sciences, Mathematical Statistics, Lund University, SE-2...

http://test1.la-press.com/non-negative-matrix-factorization-for-the-analysis-of-complex-gene-exp-a839

The Anti-tumour Agent, Cisplatin, and its Clinically Ineffective Isomer, Transplatin, Produce Unique Gene Expression Profiles in Human Cells 1442 Views

Anne M. Galea and Vincent Murray School of Biochemistry and Molecular Genetics, University of New South Wales, Sydney, NSW 2052, Australia. Abstract Cisplatin is a DNA-damaging anti-cancer agent t...

http://test1.la-press.com/the-anti-tumour-agent-cisplatin-and-its-clinically-ineffective-isomer--a854

An Integrative Analysis of microRNA and mRNA Expression - A Case Study 1705 Views

Li-Xuan Qin Department of Epidemiology and Biostatistics, Memorial Sloan-Kettering Cancer Center, New York, New York, U.S.A. Abstract Background: MicroRNAs are believed to play an important role in...

http://test1.la-press.com/an-integrative-analysis-of-microrna-and-mrna-expression---a-case-study-a873

Efficiency Analysis of Competing Tests for Finding Differentially Expressed Genes in Lung Adenocarcinoma 1390 Views

Rick Jordan1,2, Satish Patel3, Hai Hu4 and James Lyons-Weiler1,2,5 1Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, PA 15260. 2Bioinformatics Analysis Core, University of ...

http://test1.la-press.com/efficiency-analysis-of-competing-tests-for-finding-differentially-expr-a904

Modeling and Analyzing Gene Co-Expression in Hepatocellular Carcinoma Using Actor-Semiotic Networks and Centrality Signatures 848 Views

Modeling and Analyzing Gene Co-Expression in Hepatocellular Carcinoma Using Actor-Semiotic Networks and Centrality Signatures David C.Y. Fung School of Information Technologies, The University of Syd...

http://test1.la-press.com/modeling-and-analyzing-gene-co-expression-in-hepatocellular-carcinoma--a1138

Microarray-Based Cancer Prediction Using Soft Computing Approach 1240 Views

Microarray-Based Cancer Prediction Using Soft Computing Approach Xiaosheng Wang1 and Osamu Gotoh1,21Department of Intelligence Science and Technology, Graduate School of Informatics, Kyoto University,...

http://test1.la-press.com/microarray-based-cancer-prediction-using-soft-computing-approach-a1471

Applications of Microarray Technology to Acute Myelogenous Leukemia 1770 Views

Applications of Microarray Technology to Acute Myelogenous Leukemia Rashmi S. Goswami1,3, Mahadeo A. Sukhai1,2, Mariam Thomas1,2, Patricia P. Reis1 and Suzanne Kamel-Reid1,2,31Division of Applied Mole...

http://test1.la-press.com/applications-of-microarray-technology-to-acute-myelogenous-leukemia-a1242

Use of Gene Expression Profiles of Peripheral Blood Lymphocytes to Distinguish BRCA1 Mutation Carriers in High Risk Breast Cancer Families 1364 Views

Use of Gene Expression Profiles of Peripheral Blood Lymphocytes to Distinguish BRCA1 Mutation Carriers in High Risk Breast Cancer Families Marie-Laure Vuillaume, Nancy Uhrhammer, Véronique Vidal, Val...

http://test1.la-press.com/use-of-gene-expression-profiles-of-peripheral-blood-lymphocytes-to-dis-a1334

Robust Model Selection for Classification of Microarrays 1398 Views

Robust Model Selection for Classification of Microarrays Ikumi Suzuki1, Takashi Takenouchi1, Miki Ohira2, Shigeyuki Oba3,4 and Shin Ishii1,31Graduate School of Information Science, Nara Institute of S...

http://test1.la-press.com/robust-model-selection-for-classification-of-microarrays-a1516

The Bimodality Index: A Criterion for Discovering  and Ranking Bimodal Signatures from Cancer Gene Expression Profiling Data 1147 Views

The Bimodality Index: A Criterion for Discovering  and Ranking Bimodal Signatures from Cancer Gene Expression Profiling Data Jing Wang1, Sijin Wen2, W. Fraser Symmans3, Lajos Pusztai4 and Kevin R. Co...

http://test1.la-press.com/the-bimodality-index-a-criterion-for-discoveringnbsp-and-ranking-bimod-a1579

Dual KS: Defining Gene Sets with Tissue Set Enrichment Analysis 256 Views

Dual KS: Defining Gene Sets with Tissue Set Enrichment Analysis Yarong Yang3,4, Eric J. Kort1,2,3, Nader Ebrahimi4, Zhongfa Zhang2 and Bin T. Teh21Laboratory of Molecular Epidemiology, Van Andel Resea...

http://test1.la-press.com/dual-ks-defining-gene-sets-with-tissue-set-enrichment-analysis-a1808

Assessing the Evolution of Gene Expression Using Microarray Data 2014 Views

Owen Z. Woody, Andrew C. Doxey and Brendan J. McConkey Department of Biology, University of Waterloo, Waterloo, Ontario Canada Abstract Classical studies of the evolution of gene function have pred...

http://test1.la-press.com/assessing-the-evolution-of-gene-expression-using-microarray-data-a744

Exploring the Evolutionary History of the Differentially Expressed Genes between Human Populations: Action of Recent Positive Selection 4383 Views

Wei Zhang1 and M. Eileen Dolan1,2,3 1Section of Hematology/Oncology, Department of Medicine, 2Committee on Clinical Pharmacology and Pharmacogenomics, 3Cancer Research Center, The University of Chica...

http://test1.la-press.com/exploring-the-evolutionary-history-of-the-differentially-expressed-gen-a788

Exploring the Evolutionary History of the Differentially Expressed Genes between Human Populations: Action of Recent Positive Selection 4383 Views

Wei Zhang1 and M. Eileen Dolan1,2,3 1Section of Hematology/Oncology, Department of Medicine, 2Committee on Clinical Pharmacology and Pharmacogenomics, 3Cancer Research Center, The University of Chica...

http://test1.la-press.com/exploring-the-evolutionary-history-of-the-differentially-expressed-gen-a788

The identification of functional motifs in temporal gene expression analysis 2056 Views

Jiuzhou Song1, Jaime Bjarnason2, Michael G. Surette2 1Department of Animal and Avian Sciences, and University of Maryland, Maryland 20742, USA; 2Department of Microbiology and Infectious Diseases, and...

http://test1.la-press.com/the-identification-of-functional-motifs-in-temporal-gene-expression-an-a184

A Comprehensive Analysis of Gene Expression Evolution Between Humans and Mice 1424 Views

A Comprehensive Analysis of Gene Expression Evolution Between Humans and Mice Yupeng Wang1 and Romdhane Rekaya1, 2, 31Department of Animal and Dairy science, 2Institute of Bioinformatics, 3Department ...

http://test1.la-press.com/a-comprehensive-analysis-of-gene-expression-evolution-between-humans-a-a1527

A STAT3 Gene Expression Signature in Gliomas is Associated with a Poor Prognosis 1283 Views

James V. Alvarez1, Neelanjan Mukherjee2, Arnab Chakravarti2, Pierre Robe3, Gary Zhai2, Abhijit Chakladar2, Jay Loeffler2, Peter Black3 and David A. Frank1,4 1Department of Medical Oncology, Dana-Farbe...

http://test1.la-press.com/a-stat3-gene-expression-signature-in-gliomas-is-associated-with-a-poor-a424

Oncogenic Role of Engrailed-2 (En-2) in Prostate Cancer Cell Growth and Survival 1512 Views

Sudeep K. Bose, Rebecca S. Bullard and Carlton D. Donald Department of Pathology and Laboratory Medicine, Medical University of South Carolina (MUSC), 165 Ashley Avenue, PO Box 250620, Charleston, SC...

http://test1.la-press.com/oncogenic-role-of-engrailed-2-en-2-in-prostate-cancer-cell-growth-and--a591

Gene Expression Patterns in Myelodyplasia Underline the Role of Apoptosis and Differentiation in Disease Initiation and Progression 1657 Views

Merav Bar1, Derek Stirewalt1, Era Pogosova-Agadjanyan1, Vitas Wagner1, Ted Gooley1, Nissa Abbasi1, Ravi Bhatia2, H. Joachim Deeg1 and Jerald Radich1 1Clinical Research Division, Fred Hutchinson Cance...

http://test1.la-press.com/gene-expression-patterns-in-myelodyplasia-underline-the-role-of-apopto-a837

Gene Expression Analysis of Biological Systems Driving an Organotypic Model of Endometrial Carcinogenesis and Chemoprevention 1281 Views

Doris M. Benbrook1,2, Stan Lightfoot3, James Ranger-Moore4, Tongzu Liu1, Shylet Chengedza2, William L. Berry5 and Igor Dozmorov6 1Department of Obstetrics and Gynecology, University of Oklahoma Healt...

http://test1.la-press.com/gene-expression-analysis-of-biological-systems-driving-an-organot-a549

Oxygen and Cell Fate Decisions 1168 Views

Qun Lin1, Yuri Kim1, Rodolfo M. Alarcon2 and Zhong Yun1, 1Department of Therapeutic Radiology, Yale University School of Medicine, New Haven, CT 06520, U.S.A. 2Air Force Research Laboratory, Brooks C...

http://test1.la-press.com/oxygen-and-cell-fate-decisions-a550

Reconstructing a Network of Stress-Response Regulators via Dynamic System Modeling of Gene Regulation 1332 Views

Wei-Sheng Wu1,2, Wen-Hsiung Li2,3 and Bor-Sen Chen1 1Lab of Control and Systems Biology, Department of Electrical Engineering, National Tsing Hua University, Hsinchu, 300, Taiwan. 2Department of Evol...

http://test1.la-press.com/reconstructing-a-network-of-stress-response-regulators-via-dynami-a551

TAK1 mRNA Expression in the Tumor Tissue of Locally Advanced Head and Neck Cancer Patients 1275 Views

Beatriz Honorato1, Juan Alcalde2, Rafael Martinez-Monge3, Natalia Zabalegui4 and Jesús Garcia-Foncillas1 1Clinical Genetics Unit and Oncology Department, University Clinic of Navarra, Pamplona, Spa...

http://test1.la-press.com/tak1-mrna-expression-in-the-tumor-tissue-of-locally-advanced-head-a565

Pharmacodynamic Modeling of Acute and Chronic Effects of Methylprednisolone on Hepatic Urea Cycle Genes in Rats 1459 Views

Anasuya Hazra1,3, Debra C. DuBois1,2, Richard R. Almon1,2, Grayson H. Snyder2 and William J. Jusko1 1Department of Pharmaceutical Sciences. 2Department of Biological Sciences, University at Buffalo, ...

http://test1.la-press.com/pharmacodynamic-modeling-of-acute-and-chronic-effects-of-methylpr-a566

Gene Regulation System of Vasopressin and Corticotoropin-Releasing Hormone 1212 Views

Masanori Yoshida Department of Endocrinology, Nagoya Ekisaikai Hospital, 454-8502, Japan. Department of Endocrinology and Diabetes, Nagoya University Graduate School of Medicine, Nagoya 466-8550. Ab...

http://test1.la-press.com/gene-regulation-system-of-vasopressin-and-corticotoropin-releasin-a592