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Bioinformatics and Biology Insights

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Editor in Chief: Erich Bornberg-Bauer

Indexing & Databases: Pubmed, Directory of Open Access Journals, EBSCO Academic Search International, EMBase, Gale Academic OneFile, Gale Health Reference Centre, Gale InfoTrac Custom Journals, General Science Collection, Illustrata-Natural Science, Illustrata-Technology, ProQuest Biological Sciences, ProQuest Computer Science, ProQuest Natural Sciences, ProQuest SciTech, ProQuest Technology, Pubmed Central, SCOPUS

Journal Directories: EBSCO A-Z, HINARI

Processing Speed: Blind peer review by minimum of two expert reviewers and independent editorial decision within three to four weeks. Publication within average four weeks following acceptance.

ISSN: 1177-9322

H Index: 8 more info

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Structural and Functional Insights on the Myosin Superfamily (Published on 01 Feb 2012)

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Periodicity Detection Method for Small-Sample Time Series Datasets (Published on 22 Nov 2010)

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Software for Quantifying and Simulating Microsatellite Genotyping Error (Published on 12 Nov 2007)

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Evolutionary Pattern of N-Glycosylation Sequon Numbers in Eukaryotic ABC Protein Superfamilies (Published on 17 Feb 2010)

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affyPara - a Bioconductor Package for Parallelized Preprocessing Algorithms of Affymetrix Microarray Data (Published on 22 Jul 2009)

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Bioinformatics as a Tool for Assessing the Quality of Sub-Cellular Proteomic Strategies and Inferring Functions of Proteins: Plant Cell Wall Proteomics as a Test Case (Published on 18 Feb 2009)

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Gromita: A Fully Integrated Graphical User Interface to Gromacs 4 (Published on 07 Sep 2009)

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Normalization and Gene p-Value Estimation: Issues in Microarray Data Processing (Published on 28 May 2008)

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Predicting Consensus Structures for RNA Alignments Via Pseudo-Energy Minimization (Published on 03 Jun 2009)

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Neuroinformatics: From Bioinformatics to Databasing the Brain (Published on 14 May 2008)

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Construction of a Computable Network Model for DNA Damage, Autophagy, Cell Death, and Senescence (Published on 07 Mar 2013)

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Automated Detection of Conformational Epitopes Using Phage Display Peptide Sequences (Published on 01 Jul 2009)

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Identification of Drought-Responsive Universal Stress Proteins in Viridiplantae (Published on 07 Feb 2011)

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Proteomic Analysis in Diabetic Cardiomyopathy using Bioinformatics Approach (Published on 21 Jan 2008)

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Gene Expression Based Leukemia Sub‑Classification Using Committee Neural Networks (Published on 03 Sep 2009)

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Analyzing Thiol-Dependent Redox Networks in the Presence of Methylene Blue and Other Antimalarial Agents with RT-PCR- Supported in silico Modeling (Published on 03 Dec 2012)

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Gene Networks Driving Bovine Mammary Protein Synthesis During the Lactation Cycle (Published on 04 May 2011)

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Integrative Structural Modelling of the Cardiac Thin Filament: Energetics at the Interface and Conservation Patterns Reveal a Spotlight on Period 2 of Tropomyosin (Published on 03 Oct 2012)

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Identification of the RGG Box Motif in Shadoo: RNA-Binding and Signaling Roles? (Published on 19 Nov 2008)

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Universal Features for the Classification of Coding and Non-Coding DNA Sequences (Published on 03 Jun 2009)

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Methodology for Constructing Problem Definitions in Bioinformatics (Published on 24 Apr 2008)

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Unsupervised Meta-Analysis on Diverse Gene Expression Datasets Allows Insight into Gene Function and Regulation (Published on 26 May 2008)

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Expression of Metabolic, Tissue Remodeling, Oxidative Stress, and Inflammatory Pathways in Mammary Tissue During Involution in Lactating Dairy Cows (Published on 20 Sep 2010)

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Estimating the Fraction of Non-Coding RNAs in Mammalian Transcriptomes (Published on 01 Mar 2008)

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Transcriptome Analysis in Tardigrade Species Reveals Specific Molecular Pathways for Stress Adaptations (Published on 23 Apr 2012)

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Effect of Diet Supplementation on the Expression of Bovine Genes Associated with Fatty Acid Synthesis and Metabolism (Published on 31 Mar 2010)

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Association Between a Prognostic Gene Signature and Functional Gene Sets (Published on 22 Sep 2008)

Download Full Open Access Article in PDF Format (1.05 MB)

Classifying Coding DNA with Nucleotide Statistics (Published on 28 Oct 2009)

Download Full Open Access Article in PDF Format (1.85 MB)

Using the Multiple Analysis Approach to Reconstruct Phylogenetic Relationships among Planktonic Foraminifera from Highly Divergent and Length-polymorphic SSU rDNA Sequences (Published on 11 Nov 2009)

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Prediction of Functional Class of Proteins and Peptides Irrespective of Sequence Homology by Support Vector Machines (Published on 15 Oct 2007)

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Gene Copy Number Analysis for Family Data Using Semiparametric Copula Model (Published on 26 Sep 2008)

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An Improved Approach for Mapping Quantitative Trait Loci in a Pseudo-Testcross: Revisiting a Poplar Mapping Study (Published on 04 Feb 2010)

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Identification and Investigation of Drosophila Postsynaptic Density Homologs (Published on 03 Nov 2008)

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Sequence Analysis of the Full-length cDNA and Protein Structure Homology Modeling of FABP2 from Paralichthys Olivaceus (Published on 04 Jun 2009)

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Control Design for Signal Transduction Networks (Published on 09 Feb 2009)

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Identifying Stress Transcription Factors Using Gene Expression and TF-Gene Association Data (Published on 16 Oct 2007)

Download Full Open Access Article in PDF Format (748.38 KB)

IMAGE: A New Tool for the Prediction of Transcription Factor Binding Sites (Published on 03 Oct 2008)

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Conceptual Aspects of Large Meta-Analyses with Publicly Available Microarray Data: A Case Study in Oncology (Published on 23 Jan 2011)

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The Use of Artificial Neural Networks in Prediction of Congenital CMV Outcome from Sequence Data (Published on 29 May 2008)

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Beyond Field Effect: Analysis of Shrunken Centroids in Normal Esophageal Epithelia Detects Concomitant Esophageal Adenocarcinoma (Published on 01 Feb 2008)

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Inferring Transcriptional Interactions by the Optimal Integration of ChIP-chip and Knock-out Data (Published on 21 Oct 2009)

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Computational Design of Targeted Inhibitors of Polo-Like Kinase 1 (Plk1) (Published on 20 Feb 2012)

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Identification and Insilico Analysis of Retinoblastoma Serum microRNA Profile and Gene Targets Towards Prediction of Novel Serum Biomarkers (Published on 09 Jan 2013)

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Systematic Verification of Upstream Regulators of a Computable Cellular Proliferation Network Model on Non-Diseased Lung Cells Using a Dedicated Dataset (Published on 23 Jul 2013)

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Mouse Retinal Development: a Dark Horse Model for Systems Biology Research (Published on 22 May 2011)

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Effects of Feeding Periods of High Cholesterol and Saturated Fat Diet on Blood Biochemistry and Hydroxyproline Fractions in Rabbits (Published on 22 Apr 2008)

Download Full Open Access Article in PDF Format (313.58 KB)

Domain Organization of Long Autotransporter Signal Sequences (Published on 14 Dec 2009)

Download Full Open Access Article in PDF Format (2.86 MB)

Evidence of Highly Regulated Genes (in-Hubs) in Gene Networks of Saccharomyces Cerevisiae (Published on 14 Jul 2008)

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Evaluation of Combining Several Statistical Methods with a Flexible Cutoff for Identifying Differentially Expressed Genes in Pairwise Comparison of EST Sets (Published on 01 May 2008)

Download Full Open Access Article in PDF Format (2.04 MB)

A Rough Set-Based Model of HIV-1 Reverse Transcriptase Resistome (Published on 05 Oct 2009)

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Bioinformatics and Biology Insights fills a gap in current journals. Ever more often, bioinformatics and detailed analysis of data creates novel, unexpected insights. It is good to have a journal which focusses on exactly this aspect of bioinformatics research, putting the biology insights upfront with high respect for the different methods in bioinformatics.

Dr Thomas Dandekar (University of Wurzburg, European Molecular Biology Laboratory, Heidelberg, Germany)

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Article Search

Structural and Functional Insights on the Myosin Superfamily (Published on 01 Feb 2012)

Periodicity Detection Method for Small-Sample Time Series Datasets (Published on 22 Nov 2010)

Software for Quantifying and Simulating Microsatellite Genotyping Error (Published on 12 Nov 2007)

Evolutionary Pattern of N-Glycosylation Sequon Numbers in Eukaryotic ABC Protein Superfamilies (Published on 17 Feb 2010)

affyPara - a Bioconductor Package for Parallelized Preprocessing Algorithms of Affymetrix Microarray Data (Published on 22 Jul 2009)

Bioinformatics as a Tool for Assessing the Quality of Sub-Cellular Proteomic Strategies and Inferring Functions of Proteins: Plant Cell Wall Proteomics as a Test Case (Published on 18 Feb 2009)

Gromita: A Fully Integrated Graphical User Interface to Gromacs 4 (Published on 07 Sep 2009)

Normalization and Gene p-Value Estimation: Issues in Microarray Data Processing (Published on 28 May 2008)

Predicting Consensus Structures for RNA Alignments Via Pseudo-Energy Minimization (Published on 03 Jun 2009)

Neuroinformatics: From Bioinformatics to Databasing the Brain (Published on 14 May 2008)

Construction of a Computable Network Model for DNA Damage, Autophagy, Cell Death, and Senescence (Published on 07 Mar 2013)

Automated Detection of Conformational Epitopes Using Phage Display Peptide Sequences (Published on 01 Jul 2009)

Identification of Drought-Responsive Universal Stress Proteins in Viridiplantae (Published on 07 Feb 2011)

Proteomic Analysis in Diabetic Cardiomyopathy using Bioinformatics Approach (Published on 21 Jan 2008)

Gene Expression Based Leukemia Sub‑Classification Using Committee Neural Networks (Published on 03 Sep 2009)

Analyzing Thiol-Dependent Redox Networks in the Presence of Methylene Blue and Other Antimalarial Agents with RT-PCR- Supported in silico Modeling (Published on 03 Dec 2012)

Gene Networks Driving Bovine Mammary Protein Synthesis During the Lactation Cycle (Published on 04 May 2011)

Integrative Structural Modelling of the Cardiac Thin Filament: Energetics at the Interface and Conservation Patterns Reveal a Spotlight on Period 2 of Tropomyosin (Published on 03 Oct 2012)

Identification of the RGG Box Motif in Shadoo: RNA-Binding and Signaling Roles? (Published on 19 Nov 2008)

Universal Features for the Classification of Coding and Non-Coding DNA Sequences (Published on 03 Jun 2009)

Methodology for Constructing Problem Definitions in Bioinformatics (Published on 24 Apr 2008)

Unsupervised Meta-Analysis on Diverse Gene Expression Datasets Allows Insight into Gene Function and Regulation (Published on 26 May 2008)

Expression of Metabolic, Tissue Remodeling, Oxidative Stress, and Inflammatory Pathways in Mammary Tissue During Involution in Lactating Dairy Cows (Published on 20 Sep 2010)

Estimating the Fraction of Non-Coding RNAs in Mammalian Transcriptomes (Published on 01 Mar 2008)

Transcriptome Analysis in Tardigrade Species Reveals Specific Molecular Pathways for Stress Adaptations (Published on 23 Apr 2012)

Effect of Diet Supplementation on the Expression of Bovine Genes Associated with Fatty Acid Synthesis and Metabolism (Published on 31 Mar 2010)

Association Between a Prognostic Gene Signature and Functional Gene Sets (Published on 22 Sep 2008)

Classifying Coding DNA with Nucleotide Statistics (Published on 28 Oct 2009)

Using the Multiple Analysis Approach to Reconstruct Phylogenetic Relationships among Planktonic Foraminifera from Highly Divergent and Length-polymorphic SSU rDNA Sequences (Published on 11 Nov 2009)

Prediction of Functional Class of Proteins and Peptides Irrespective of Sequence Homology by Support Vector Machines (Published on 15 Oct 2007)

Gene Copy Number Analysis for Family Data Using Semiparametric Copula Model (Published on 26 Sep 2008)

An Improved Approach for Mapping Quantitative Trait Loci in a Pseudo-Testcross: Revisiting a Poplar Mapping Study (Published on 04 Feb 2010)

Identification and Investigation of Drosophila Postsynaptic Density Homologs (Published on 03 Nov 2008)

Sequence Analysis of the Full-length cDNA and Protein Structure Homology Modeling of FABP2 from Paralichthys Olivaceus (Published on 04 Jun 2009)

Control Design for Signal Transduction Networks (Published on 09 Feb 2009)

Identifying Stress Transcription Factors Using Gene Expression and TF-Gene Association Data (Published on 16 Oct 2007)

IMAGE: A New Tool for the Prediction of Transcription Factor Binding Sites (Published on 03 Oct 2008)

Conceptual Aspects of Large Meta-Analyses with Publicly Available Microarray Data: A Case Study in Oncology (Published on 23 Jan 2011)

The Use of Artificial Neural Networks in Prediction of Congenital CMV Outcome from Sequence Data (Published on 29 May 2008)

Beyond Field Effect: Analysis of Shrunken Centroids in Normal Esophageal Epithelia Detects Concomitant Esophageal Adenocarcinoma (Published on 01 Feb 2008)

Inferring Transcriptional Interactions by the Optimal Integration of ChIP-chip and Knock-out Data (Published on 21 Oct 2009)

Computational Design of Targeted Inhibitors of Polo-Like Kinase 1 (Plk1) (Published on 20 Feb 2012)

Identification and Insilico Analysis of Retinoblastoma Serum microRNA Profile and Gene Targets Towards Prediction of Novel Serum Biomarkers (Published on 09 Jan 2013)

Systematic Verification of Upstream Regulators of a Computable Cellular Proliferation Network Model on Non-Diseased Lung Cells Using a Dedicated Dataset (Published on 23 Jul 2013)

Mouse Retinal Development: a Dark Horse Model for Systems Biology Research (Published on 22 May 2011)

Effects of Feeding Periods of High Cholesterol and Saturated Fat Diet on Blood Biochemistry and Hydroxyproline Fractions in Rabbits (Published on 22 Apr 2008)

Domain Organization of Long Autotransporter Signal Sequences (Published on 14 Dec 2009)

Evidence of Highly Regulated Genes (in-Hubs) in Gene Networks of Saccharomyces Cerevisiae (Published on 14 Jul 2008)

Evaluation of Combining Several Statistical Methods with a Flexible Cutoff for Identifying Differentially Expressed Genes in Pairwise Comparison of EST Sets (Published on 01 May 2008)

A Rough Set-Based Model of HIV-1 Reverse Transcriptase Resistome (Published on 05 Oct 2009)

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