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Pharmacodynamic/Pharmacogenomic Modeling of Insulin Resistance Genes in Rat Muscle After Methylprednisolone Treatment: Exploring Regulatory Signaling Cascades

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Publication Date: 23 Apr 2008

Journal: Gene Regulation and Systems Biology

Citation: Gene Regulation and Systems Biology 2008:2 141-161

GRSB journal

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Zhenling Yao1, Eric P. Hoffman3, Svetlana Ghimbovschi3, Debra C. DuBois1,2, Richard R. Almon1,2 and William J. Jusko1

1Department of Pharmaceutical Sciences, School of Pharmacy and Pharmaceutical Sciences, 2Department of Biological Sciences, State University of New York at Buffalo, Buffalo, New York. 3Children’s National Research Center, Washington D.C.

Abstract

Corticosteroids (CS) effects on insulin resistance related genes in rat skeletal muscle were studied. In our acute study, adrenalectomized (ADX) rats were given single doses of 50 mg/kg methylprednisolone (MPL) intravenously. In our chronic study, ADX rats were implanted with Alzet mini-pumps giving zero-order release rates of 0.3 mg/kg/h MPL and sacrificed at various times up to 7 days. Total RNA was extracted from gastrocnemius muscles and hybridized to Affymetrix GeneChips. Data mining and literature searches identified 6 insulin resistance related genes which exhibited complex regulatory pathways. Insulin receptor substrate-1 (IRS-1), uncoupling protein 3 (UCP3), pyruvate dehydrogenase kinase isoenzyme 4 (PDK4), fatty acid translocase (FAT) and glycerol-3-phosphate acyltransferase (GPAT) dynamic profiles were modeled with mutual effects by calculated nuclear drug-receptor complex (DR(N)) and transcription factors. The oscillatory feature of endothelin-1 (ET-1) expression was depicted by a negative feedback loop. These integrated models provide test- able quantitative hypotheses for these regulatory cascades.


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