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Cancer Informatics

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Editor in Chief: J. T. Efird

Indexing & Databases: Pubmed, Directory of Open Access Journals, EBSCO Academic Search International, EMBase, Gale Academic OneFile, Gale Health Reference Centre, Gale InfoTrac Custom Journals, Illustrata-Natural Science, ProQuest Biological Sciences, ProQuest Natural Sciences, ProQuest SciTech, ProQuest Technology, Pubmed Central, SCOPUS

Journal Directories: EBSCO A-Z, HINARI

Processing Speed: Blind peer review by minimum of two expert reviewers and independent editorial decision within three to four weeks. Publication within average four weeks following acceptance.

ISSN: 1176-9351

H Index: 17 more info

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Bias, Randomization, and Ovarian Proteomic Data: A Reply to "Producers and Consumers" (Published on 26 Feb 2007)

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Application of a New Probabilistic Model for Mining Implicit Associated Cancer Genes from OMIM and Medline (Published on 25 Feb 2007)

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Design of Early Validation Trials of Biomarkers (Published on 25 Feb 2007)

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Detecting Outlier Microarray Arrays by Correlation and Percentage of Outliers Spots (Published on 24 Feb 2007)

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Proteomics: Analysis of Spectral Data (Published on 24 Feb 2007)

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An Empirical Study of Univariate and Genetic Algorithm-Based Feature Selection in Binary Classification with Microarray Data (Published on 23 Feb 2007)

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Characterising phase variations in MALDI-TOF data and correcting them by peak alignment (Published on 23 Feb 2007)

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A Hybrid Approach for Biomarker Discovery from Microarray Gene Expression Data for Cancer Classification (Published on 22 Feb 2007)

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Impact of Freeze-thaw Cycles and Storage Time on Plasma Samples Used in Mass Spectrometry Based Biomarker Discovery Projects (Published on 22 Feb 2007)

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Integrative Analysis of Gene Expression Data Including an Assessment of Pathway Enrichment for Predicting Prostate Cancer (Published on 21 Feb 2007)

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Assessing the Statistical Significance of the Achieved Classification Error of Classifiers Constructed using Serum Peptide Profiles, and a Prescription for Random Sampling Repeated Studies for Massive High-Throughput Genomic and Proteomic Studies (Published on 21 Feb 2007)

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Heterogeneous Biomedical Database Integration Using a Hybrid Strategy: A p53 Cancer Research Database (Published on 20 Feb 2007)

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Novel approaches to smoothing and comparing SELDI TOF spectra (Published on 20 Feb 2007)

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Data Perturbation Independent Diagnosis and Validation of Breast Cancer Subtypes Using Clustering and Patterns (Published on 19 Feb 2007)

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The Need for Review and Understanding of SELDI/MALDI Mass Spectroscopy Data Prior to Analysis (Published on 19 Feb 2007)

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Construction and Clarification of Dynamic Gene Regulatory Network of Cancer Cell Cycle via Microarray Data (Published on 18 Feb 2007)

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Understanding the characteristics of mass spectrometry data through the use of simulation (Published on 18 Feb 2007)

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Tumor Growth Rate Approximation-Assisted Estimation (Published on 17 Feb 2007)

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A mathematical model for the onset of avascular tumor growth in response to the loss of p53 function (Published on 17 Feb 2007)

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Ovarian Cancer Classification based on Mass Spectrometry Analysis of Sera (Published on 17 Feb 2007)

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On the Number of Close-to-Optimal Feature Sets (Published on 16 Feb 2007)

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Challenges in the Analysis of Mass-Throughput Data: A Technical Commentary from the Statistical Machine Learning Perspective (Published on 16 Feb 2007)

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Applying a 4D multiscale in vivo tumor growth model to the exploration of radiotherapy scheduling: The effects of weekend treatment gaps and p53 gene status on the response of fast growing solid tumors (Published on 16 Feb 2007)

Download Full Open Access Article in PDF Format (1.12 MB)

Databases and QSAR for Cancer Research (Published on 15 Feb 2007)

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Merging microarray data, robust feature selection, and predicting prognosis in prostate cancer (Published on 14 Feb 2007)

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Spotlight on Cancer Informatics: Georgios S Stamatakos, PhD (Published on 13 Feb 2007)

Download Full Open Access Article in PDF Format (171.43 KB)

Dedication: Chiara Silvestrini (Published on 12 Feb 2007)

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PubMed QUEST: The PubMed Query Search Tool. An informatics tool to aid cancer centers and cancer investigators in searching the PubMed databases (Published on 12 Feb 2007)

Download Full Open Access Article in PDF Format (284.71 KB)

Applications of Machine Learning in Cancer Prediction and Prognosis (Published on 11 Feb 2007)

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Data Mining for Gene Networks Relevant to Poor Prognosis in Lung Cancer via Backward-Chaining Rule Induction (Published on 10 Feb 2007)

Download Full Open Access Article in PDF Format (724.17 KB)

Computational Methods for the Analysis of Array Comparative Genomic Hybridization (Published on 10 Feb 2007)

Download Full Open Access Article in PDF Format (1.95 MB)

Identification and Characterization of Renal Cell Carcinoma Gene Markers (Published on 09 Feb 2007)

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Multi-marker testing for cancer: what can we learn from modern prenatal testing for Trisomy-21 (Published on 09 Feb 2007)

Download Full Open Access Article in PDF Format (169.16 KB)

CGHregions: Dimension Reduction for Array CGH Data with Minimal Information Loss (Published on 08 Feb 2007)

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aCGHViewer: A Generic Visualization Tool For aCGH data (Published on 08 Feb 2007)

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Gamma-Normal-Gamma Mixture Model for Detecting Differentially Methylated Loci in Three Breast Cancer Cell Lines (Published on 07 Feb 2007)

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Bioinformatics resources for cancer research with an emphasis on gene function and structure prediction tools (Published on 07 Feb 2007)

Download Full Open Access Article in PDF Format (359.24 KB)

Statistical Redundancy Testing for Improved Gene Selection in Cancer Classification Using Microarray Data (Published on 06 Feb 2007)

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Cancer Informatics Vision: caBIG (Published on 06 Feb 2007)

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Identifying Biomarkers from Mass Spectrometry Data with Ordinal Outcome (Published on 05 Feb 2007)

Download Full Open Access Article in PDF Format (404.29 KB)

Magellan: A Web Based System for the Integrated Analysis of Heterogeneous Biological Data and Annotations; Application to DNA Copy Number and Expression Data in Ovarian Cancer (Published on 05 Feb 2007)

Download Full Open Access Article in PDF Format (202.08 KB)

Analysis of Gene Expression Data Using BRB-Array Tools (Published on 04 Feb 2007)

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Spotlight on Cancer Informatics: Constantin Alifieris, M.D., Ph.D. (Published on 04 Feb 2007)

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Asterias: A Parallelized Web-based Suite for the Analysis of Expression and aCGH Data (Published on 03 Feb 2007)

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Biomarker Development Study Publication Standards are Dead - Long Live Biomarker Development Study Publication Standards! (Published on 03 Feb 2007)

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Article Search

Bias, Randomization, and Ovarian Proteomic Data: A Reply to "Producers and Consumers" (Published on 26 Feb 2007)

Application of a New Probabilistic Model for Mining Implicit Associated Cancer Genes from OMIM and Medline (Published on 25 Feb 2007)

Design of Early Validation Trials of Biomarkers (Published on 25 Feb 2007)

Detecting Outlier Microarray Arrays by Correlation and Percentage of Outliers Spots (Published on 24 Feb 2007)

Proteomics: Analysis of Spectral Data (Published on 24 Feb 2007)

An Empirical Study of Univariate and Genetic Algorithm-Based Feature Selection in Binary Classification with Microarray Data (Published on 23 Feb 2007)

Characterising phase variations in MALDI-TOF data and correcting them by peak alignment (Published on 23 Feb 2007)

A Hybrid Approach for Biomarker Discovery from Microarray Gene Expression Data for Cancer Classification (Published on 22 Feb 2007)

Impact of Freeze-thaw Cycles and Storage Time on Plasma Samples Used in Mass Spectrometry Based Biomarker Discovery Projects (Published on 22 Feb 2007)

Integrative Analysis of Gene Expression Data Including an Assessment of Pathway Enrichment for Predicting Prostate Cancer (Published on 21 Feb 2007)

Assessing the Statistical Significance of the Achieved Classification Error of Classifiers Constructed using Serum Peptide Profiles, and a Prescription for Random Sampling Repeated Studies for Massive High-Throughput Genomic and Proteomic Studies (Published on 21 Feb 2007)

Heterogeneous Biomedical Database Integration Using a Hybrid Strategy: A p53 Cancer Research Database (Published on 20 Feb 2007)

Novel approaches to smoothing and comparing SELDI TOF spectra (Published on 20 Feb 2007)

Data Perturbation Independent Diagnosis and Validation of Breast Cancer Subtypes Using Clustering and Patterns (Published on 19 Feb 2007)

The Need for Review and Understanding of SELDI/MALDI Mass Spectroscopy Data Prior to Analysis (Published on 19 Feb 2007)

Construction and Clarification of Dynamic Gene Regulatory Network of Cancer Cell Cycle via Microarray Data (Published on 18 Feb 2007)

Understanding the characteristics of mass spectrometry data through the use of simulation (Published on 18 Feb 2007)

Tumor Growth Rate Approximation-Assisted Estimation (Published on 17 Feb 2007)

A mathematical model for the onset of avascular tumor growth in response to the loss of p53 function (Published on 17 Feb 2007)

Ovarian Cancer Classification based on Mass Spectrometry Analysis of Sera (Published on 17 Feb 2007)

On the Number of Close-to-Optimal Feature Sets (Published on 16 Feb 2007)

Challenges in the Analysis of Mass-Throughput Data: A Technical Commentary from the Statistical Machine Learning Perspective (Published on 16 Feb 2007)

Applying a 4D multiscale in vivo tumor growth model to the exploration of radiotherapy scheduling: The effects of weekend treatment gaps and p53 gene status on the response of fast growing solid tumors (Published on 16 Feb 2007)

Databases and QSAR for Cancer Research (Published on 15 Feb 2007)

Merging microarray data, robust feature selection, and predicting prognosis in prostate cancer (Published on 14 Feb 2007)

Spotlight on Cancer Informatics: Georgios S Stamatakos, PhD (Published on 13 Feb 2007)

Dedication: Chiara Silvestrini (Published on 12 Feb 2007)

PubMed QUEST: The PubMed Query Search Tool. An informatics tool to aid cancer centers and cancer investigators in searching the PubMed databases (Published on 12 Feb 2007)

Applications of Machine Learning in Cancer Prediction and Prognosis (Published on 11 Feb 2007)

Data Mining for Gene Networks Relevant to Poor Prognosis in Lung Cancer via Backward-Chaining Rule Induction (Published on 10 Feb 2007)

Computational Methods for the Analysis of Array Comparative Genomic Hybridization (Published on 10 Feb 2007)

Identification and Characterization of Renal Cell Carcinoma Gene Markers (Published on 09 Feb 2007)

Multi-marker testing for cancer: what can we learn from modern prenatal testing for Trisomy-21 (Published on 09 Feb 2007)

CGHregions: Dimension Reduction for Array CGH Data with Minimal Information Loss (Published on 08 Feb 2007)

aCGHViewer: A Generic Visualization Tool For aCGH data (Published on 08 Feb 2007)

Gamma-Normal-Gamma Mixture Model for Detecting Differentially Methylated Loci in Three Breast Cancer Cell Lines (Published on 07 Feb 2007)

Bioinformatics resources for cancer research with an emphasis on gene function and structure prediction tools (Published on 07 Feb 2007)

Statistical Redundancy Testing for Improved Gene Selection in Cancer Classification Using Microarray Data (Published on 06 Feb 2007)

Cancer Informatics Vision: caBIG (Published on 06 Feb 2007)

Identifying Biomarkers from Mass Spectrometry Data with Ordinal Outcome (Published on 05 Feb 2007)

Magellan: A Web Based System for the Integrated Analysis of Heterogeneous Biological Data and Annotations; Application to DNA Copy Number and Expression Data in Ovarian Cancer (Published on 05 Feb 2007)

Analysis of Gene Expression Data Using BRB-Array Tools (Published on 04 Feb 2007)

Spotlight on Cancer Informatics: Constantin Alifieris, M.D., Ph.D. (Published on 04 Feb 2007)

Asterias: A Parallelized Web-based Suite for the Analysis of Expression and aCGH Data (Published on 03 Feb 2007)

Biomarker Development Study Publication Standards are Dead - Long Live Biomarker Development Study Publication Standards! (Published on 03 Feb 2007)

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Bias, Randomization, and Ovarian Proteomic Data: A Reply to "Producers and Consumers" (Published on 26 Feb 2007)