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Bioinformatics and Biology Insights

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Editor in Chief: Erich Bornberg-Bauer

Indexing & Databases: Pubmed, Directory of Open Access Journals, EBSCO Academic Search International, EMBase, Gale Academic OneFile, Gale Health Reference Centre, Gale InfoTrac Custom Journals, General Science Collection, Illustrata-Natural Science, Illustrata-Technology, ProQuest Biological Sciences, ProQuest Computer Science, ProQuest Natural Sciences, ProQuest SciTech, ProQuest Technology, Pubmed Central, SCOPUS

Journal Directories: EBSCO A-Z, HINARI

Processing Speed: Blind peer review by minimum of two expert reviewers and independent editorial decision within three to four weeks. Publication within average four weeks following acceptance.

ISSN: 1177-9322

H Index: 8 more info

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Predicting Consensus Structures for RNA Alignments Via Pseudo-Energy Minimization (Published on 03 Jun 2009)

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Universal Features for the Classification of Coding and Non-Coding DNA Sequences (Published on 03 Jun 2009)

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Bioinformatics as a Tool for Assessing the Quality of Sub-Cellular Proteomic Strategies and Inferring Functions of Proteins: Plant Cell Wall Proteomics as a Test Case (Published on 18 Feb 2009)

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Control Design for Signal Transduction Networks (Published on 09 Feb 2009)

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Identification of the RGG Box Motif in Shadoo: RNA-Binding and Signaling Roles? (Published on 19 Nov 2008)

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Identification and Investigation of Drosophila Postsynaptic Density Homologs (Published on 03 Nov 2008)

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IMAGE: A New Tool for the Prediction of Transcription Factor Binding Sites (Published on 03 Oct 2008)

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Gene Copy Number Analysis for Family Data Using Semiparametric Copula Model (Published on 26 Sep 2008)

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Association Between a Prognostic Gene Signature and Functional Gene Sets (Published on 22 Sep 2008)

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Designing Toxicogenomics Studies that use DNA Array Technology (Published on 14 Aug 2008)

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Evidence of Highly Regulated Genes (in-Hubs) in Gene Networks of Saccharomyces Cerevisiae (Published on 14 Jul 2008)

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The Use of Artificial Neural Networks in Prediction of Congenital CMV Outcome from Sequence Data (Published on 29 May 2008)

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Normalization and Gene p-Value Estimation: Issues in Microarray Data Processing (Published on 28 May 2008)

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Unsupervised Meta-Analysis on Diverse Gene Expression Datasets Allows Insight into Gene Function and Regulation (Published on 26 May 2008)

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Neuroinformatics: From Bioinformatics to Databasing the Brain (Published on 14 May 2008)

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Evaluation of Combining Several Statistical Methods with a Flexible Cutoff for Identifying Differentially Expressed Genes in Pairwise Comparison of EST Sets (Published on 01 May 2008)

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Methodology for Constructing Problem Definitions in Bioinformatics (Published on 24 Apr 2008)

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Effects of Feeding Periods of High Cholesterol and Saturated Fat Diet on Blood Biochemistry and Hydroxyproline Fractions in Rabbits (Published on 22 Apr 2008)

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Topological Properties of Co-Occurrence Networks in Published Gene Expression Signatures (Published on 17 Apr 2008)

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Borges Dilemma, Fundamental Laws, and Systems Biology (Published on 10 Apr 2008)

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Searching for Factors that Distinguish Disease-Prone and Disease-Resistant Prions via Sequence Analysis (Published on 12 Mar 2008)

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Ontologies for Bioinformatics (Published on 12 Mar 2008)

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Utility of Computational Methods to Identify the Apoptosis Machinery in Unicellular Eukaryotes (Published on 12 Mar 2008)

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Coarse-Grained Models Reveal Functional Dynamics – II. Molecular Dynamics Simulation at the Coarse-Grained Level – Theories and Biological Applications (Published on 05 Mar 2008)

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Coarse-Grained Models Reveal Functional Dynamics - I. Elastic Network Models – Theories, Comparisons and Perspectives (Published on 04 Mar 2008)

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Estimating the Fraction of Non-Coding RNAs in Mammalian Transcriptomes (Published on 01 Mar 2008)

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A New Test Statistic Based on Shrunken Sample Variance for Identifying Differentially Expressed Genes in Small Microarray Experiments (Published on 29 Feb 2008)

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Distribution of Polymorphic and Non-Polymorphic Microsatellite Repeats in Xenopus tropicalis (Published on 26 Feb 2008)

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A Unified Discussion on the Concept of Score Functions Used in the Context of Nonparametric Linkage Analysis (Published on 14 Feb 2008)

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The Penna Model of Biological Aging (Published on 08 Feb 2008)

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The HapMap Resource is Providing New Insights into Ourselves and its Application to Pharmacogenomics (Published on 01 Feb 2008)

Download Full Open Access Article in PDF Format (326.65 KB)

Using a Seed-Network to Query Multiple Large-Scale Gene Expression Datasets from the Developing Retina in Order to Identify and Prioritize Experimental Targets (Published on 01 Feb 2008)

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Structural Re-Alignment in an Immunogenic Surface Region of Ricin A Chain (Published on 01 Feb 2008)

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Beyond Field Effect: Analysis of Shrunken Centroids in Normal Esophageal Epithelia Detects Concomitant Esophageal Adenocarcinoma (Published on 01 Feb 2008)

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Characterization of Non-Trivial Neighborhood Fold Constraints from Protein Sequences using Generalized Topohydrophobicity (Published on 31 Jan 2008)

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HMM_RA: An Improved Method for Alpha-Helical Transmembrane Protein Topology Prediction (Published on 31 Jan 2008)

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Including Functional Annotations and Extending the Collection of Structural Classifications of Protein Loops (ArchDB) (Published on 30 Jan 2008)

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Proteomic Analysis in Diabetic Cardiomyopathy using Bioinformatics Approach (Published on 21 Jan 2008)

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Peptide Vocabulary Analysis Reveals Ultra-Conservation and Homonymity in Protein Sequences (Published on 12 Dec 2007)

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Software for Quantifying and Simulating Microsatellite Genotyping Error (Published on 12 Nov 2007)

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Identifying Stress Transcription Factors Using Gene Expression and TF-Gene Association Data (Published on 16 Oct 2007)

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Prediction of Functional Class of Proteins and Peptides Irrespective of Sequence Homology by Support Vector Machines (Published on 15 Oct 2007)

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GSMA: Gene Set Matrix Analysis, An Automated Method for Rapid Hypothesis Testing of Gene Expression Data (Published on 15 Oct 2007)

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Screening the Single Nucleotide Polymorphisms in Patients with Internal Carotid Artery Stenosis by Oligonucleotide-Based Custom DNA Array (Published on 12 Oct 2007)

Download Full Open Access Article in PDF Format (359.11 KB)

Rarity of Somatic Mutation and Frequency of Normal Sequence Variation Detected in Sporadic Colon Adenocarcinoma Using High-Throughput cDNA Sequencing (Published on 17 Sep 2007)

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Bioinformatics and Biology Insights fills a gap in current journals. Ever more often, bioinformatics and detailed analysis of data creates novel, unexpected insights. It is good to have a journal which focusses on exactly this aspect of bioinformatics research, putting the biology insights upfront with high respect for the different methods in bioinformatics.

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Article Search

Predicting Consensus Structures for RNA Alignments Via Pseudo-Energy Minimization (Published on 03 Jun 2009)

Universal Features for the Classification of Coding and Non-Coding DNA Sequences (Published on 03 Jun 2009)

Bioinformatics as a Tool for Assessing the Quality of Sub-Cellular Proteomic Strategies and Inferring Functions of Proteins: Plant Cell Wall Proteomics as a Test Case (Published on 18 Feb 2009)

Control Design for Signal Transduction Networks (Published on 09 Feb 2009)

Identification of the RGG Box Motif in Shadoo: RNA-Binding and Signaling Roles? (Published on 19 Nov 2008)

Identification and Investigation of Drosophila Postsynaptic Density Homologs (Published on 03 Nov 2008)

IMAGE: A New Tool for the Prediction of Transcription Factor Binding Sites (Published on 03 Oct 2008)

Gene Copy Number Analysis for Family Data Using Semiparametric Copula Model (Published on 26 Sep 2008)

Association Between a Prognostic Gene Signature and Functional Gene Sets (Published on 22 Sep 2008)

Designing Toxicogenomics Studies that use DNA Array Technology (Published on 14 Aug 2008)

Evidence of Highly Regulated Genes (in-Hubs) in Gene Networks of Saccharomyces Cerevisiae (Published on 14 Jul 2008)

The Use of Artificial Neural Networks in Prediction of Congenital CMV Outcome from Sequence Data (Published on 29 May 2008)

Normalization and Gene p-Value Estimation: Issues in Microarray Data Processing (Published on 28 May 2008)

Unsupervised Meta-Analysis on Diverse Gene Expression Datasets Allows Insight into Gene Function and Regulation (Published on 26 May 2008)

Neuroinformatics: From Bioinformatics to Databasing the Brain (Published on 14 May 2008)

Evaluation of Combining Several Statistical Methods with a Flexible Cutoff for Identifying Differentially Expressed Genes in Pairwise Comparison of EST Sets (Published on 01 May 2008)

Methodology for Constructing Problem Definitions in Bioinformatics (Published on 24 Apr 2008)

Effects of Feeding Periods of High Cholesterol and Saturated Fat Diet on Blood Biochemistry and Hydroxyproline Fractions in Rabbits (Published on 22 Apr 2008)

Topological Properties of Co-Occurrence Networks in Published Gene Expression Signatures (Published on 17 Apr 2008)

Borges Dilemma, Fundamental Laws, and Systems Biology (Published on 10 Apr 2008)

Searching for Factors that Distinguish Disease-Prone and Disease-Resistant Prions via Sequence Analysis (Published on 12 Mar 2008)

Ontologies for Bioinformatics (Published on 12 Mar 2008)

Utility of Computational Methods to Identify the Apoptosis Machinery in Unicellular Eukaryotes (Published on 12 Mar 2008)

Coarse-Grained Models Reveal Functional Dynamics – II. Molecular Dynamics Simulation at the Coarse-Grained Level – Theories and Biological Applications (Published on 05 Mar 2008)

Coarse-Grained Models Reveal Functional Dynamics - I. Elastic Network Models – Theories, Comparisons and Perspectives (Published on 04 Mar 2008)

Estimating the Fraction of Non-Coding RNAs in Mammalian Transcriptomes (Published on 01 Mar 2008)

A New Test Statistic Based on Shrunken Sample Variance for Identifying Differentially Expressed Genes in Small Microarray Experiments (Published on 29 Feb 2008)

Distribution of Polymorphic and Non-Polymorphic Microsatellite Repeats in Xenopus tropicalis (Published on 26 Feb 2008)

A Unified Discussion on the Concept of Score Functions Used in the Context of Nonparametric Linkage Analysis (Published on 14 Feb 2008)

The Penna Model of Biological Aging (Published on 08 Feb 2008)

The HapMap Resource is Providing New Insights into Ourselves and its Application to Pharmacogenomics (Published on 01 Feb 2008)

Using a Seed-Network to Query Multiple Large-Scale Gene Expression Datasets from the Developing Retina in Order to Identify and Prioritize Experimental Targets (Published on 01 Feb 2008)

Structural Re-Alignment in an Immunogenic Surface Region of Ricin A Chain (Published on 01 Feb 2008)

Beyond Field Effect: Analysis of Shrunken Centroids in Normal Esophageal Epithelia Detects Concomitant Esophageal Adenocarcinoma (Published on 01 Feb 2008)

Characterization of Non-Trivial Neighborhood Fold Constraints from Protein Sequences using Generalized Topohydrophobicity (Published on 31 Jan 2008)

HMM_RA: An Improved Method for Alpha-Helical Transmembrane Protein Topology Prediction (Published on 31 Jan 2008)

Including Functional Annotations and Extending the Collection of Structural Classifications of Protein Loops (ArchDB) (Published on 30 Jan 2008)

Proteomic Analysis in Diabetic Cardiomyopathy using Bioinformatics Approach (Published on 21 Jan 2008)

Peptide Vocabulary Analysis Reveals Ultra-Conservation and Homonymity in Protein Sequences (Published on 12 Dec 2007)

Software for Quantifying and Simulating Microsatellite Genotyping Error (Published on 12 Nov 2007)

Identifying Stress Transcription Factors Using Gene Expression and TF-Gene Association Data (Published on 16 Oct 2007)

Prediction of Functional Class of Proteins and Peptides Irrespective of Sequence Homology by Support Vector Machines (Published on 15 Oct 2007)

GSMA: Gene Set Matrix Analysis, An Automated Method for Rapid Hypothesis Testing of Gene Expression Data (Published on 15 Oct 2007)

Screening the Single Nucleotide Polymorphisms in Patients with Internal Carotid Artery Stenosis by Oligonucleotide-Based Custom DNA Array (Published on 12 Oct 2007)

Rarity of Somatic Mutation and Frequency of Normal Sequence Variation Detected in Sporadic Colon Adenocarcinoma Using High-Throughput cDNA Sequencing (Published on 17 Sep 2007)

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