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Genomics

Range of open access peer reviewed Genomics journals & associated research articles. Read full text articles or submit your research for publishing


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Results 350-400 of 525 for Genomics

RBM10 Modulates Apoptosis and Influences TNF-α Gene Expression
Ke Wang, Mackensey L. Bacon, Julie J. Tessier, Nina D. Rintala-Maki, Vanessa Tang and Leslie C. Sutherland
Journal of Cell Death 2012:5 1-19
Original Research | Published on 27 Feb 2012



Inferring the Phylogeny of Bovidae Using Mitochondrial DNA Sequences: Resolving Power of Individual Genes Relative to Complete Genomes
Ibrahim A. Arif, Mohammad A. Bakir and Haseeb A. Khan
Evolutionary Bioinformatics 2012:8 139-150
Original Research | Published on 20 Feb 2012



Role of Metastasis in Hypertabastic Survival Analysis of Breast Cancer: Interaction with Clinical and Gene Expression Variables
Mohammad A. Tabatabai, Wayne M. Eby, Nadim Nimeh, and Karan P. Singh.
Cancer Growth and Metastasis 2012:5 1-17
Original Research | Published on 20 Feb 2012



Transcriptional Changes of Blood Eosinophils After Methacholine Inhalation Challenge in Asthmatics
Scott J. Tebbutt, Jian-Qing He, Amrit Singh, Casey P. Shannon, Jian Ruan, and Chris Carlsten
Genomics Insights 2012:5 1-12
Original Research | Published on 30 Jan 2012



Oncogene Mutation Survey in MPNST Cell Lines Enhances the Dominant Role of Hyperactive Ras in NF1 Associated Pro-Survival and Malignancy
Daochun Sun, Michael A. Tainsky and Ramsi Haddad
Translational Oncogenomics 2012:5 1-7
Short Report | Published on 18 Jan 2012



Interkingdom Gene Transfer May Contribute to the Evolution of Phytopathogenicity in Botrytis Cinerea
Bo Zhu, Qing Zhou, Guanlin Xie, Guoqing Zhang, Xiaowei Zhang, Yanli Wang, Gunchang Sun, Bin Li and Gulei Jin
Evolutionary Bioinformatics 2012:8 105-117
Original Research | Published on 11 Jan 2012



Evolutionary Genomics of Genes Involved in Olfactory Behavior in the Drosophila melanogaster Species Group
Nicolás Lavagnino, François Serra, Leonardo Arbiza, Hernán Dopazo and Esteban Hasson,
Evolutionary Bioinformatics 2012:8 89-104
Original Research | Published on 09 Jan 2012



Identification of cis-Regulatory Elements in the dmyc Gene of Drosophila Melanogaster
Jasmine Kharazmi, Cameron Moshfegh and Thomas Brody
Gene Regulation and Systems Biology 2012:6 15-42
Original Research | Published on 21 Dec 2011



LCGbase: A Comprehensive Database for Lineage-Based Co-regulated Genes
Dapeng Wang, Yubin Zhang, Zhonghua Fan, Guiming Liu and Jun Yu
Evolutionary Bioinformatics 2012:8 39-46
Original Research | Published on 13 Dec 2011



Alpha-Tocopherol Alters Transcription Activities that Modulates Tumor Necrosis Factor Alpha (TNF-a) Induced Inflammatory Response in Bovine Cells
Cong-Jun Li, Robert W. Li, Stanislaw Kahl and Theodore H. Elsasser
Gene Regulation and Systems Biology 2012:6 1-14
Original Research | Published on 05 Dec 2011



Aberrant Signaling Pathways in Squamous Cell Lung Carcinoma
Ivy Shi, Nooshin Hashemi Sadraei, Zhong-Hui Duan, and Ting Shi
Cancer Informatics 2011:10 273-285
Original Research | Published on 21 Nov 2011



Biomolecular Self-Defense and Futility of High-Specificity Therapeutic Targeting
Simon Rosenfeld
Gene Regulation and Systems Biology 2011:5 89-104
Perspective | Published on 21 Nov 2011



Factors Affecting Synonymous Codon Usage Bias in Chloroplast Genome of Oncidium Gower Ramsey
Chen Xu, Xiaoning Cai, Quanzhan Chen, Hongxia Zhou, Yao Cai and Ailing Ben
Evolutionary Bioinformatics 2011:7 271-278
Original Research | Published on 14 Nov 2011



In Silico Prediction of Evolutionarily Conserved GC-Rich Elements Associated with Antigenic Proteins of Plasmodium falciparum
Porkodi Panneerselvam, Praveen Bawankar, Surashree Kulkarni, and Swati Patankar
Evolutionary Bioinformatics 2011:7 235-255
Original Research | Published on 10 Nov 2011



Application of Structure Equation Modeling for Inferring a Serial Transcriptional Regulation in Yeast
Sachiyo Aburatani
Gene Regulation and Systems Biology 2011:5 75-88
Original Research | Published on 10 Nov 2011



Characterization and Inference of Gene Gain/Loss Along Burkholderia Evolutionary History
Bo Zhu, Shengli Zhou, Miaomiao Lou, Jun Zhu, Bin Li, Guanlin Xie, GuLei Jin, and René De Mot
Evolutionary Bioinformatics 2011:7 191-200
Original Research | Published on 18 Oct 2011



Functional Annotation Analytics of Rhodopseudomonas palustris Genomes
Shaneka S. Simmons, Raphael D. Isokpehi, Shyretha D. Brown, Donee L. McAllister, Charnia C. Hall, Wanaki M. McDuffy, Tamara L. Medley, Udensi K. Udensi, Rajendram V. Rajnarayanan, Wellington K. Ayensu and Hari H.P. Cohly
Bioinformatics and Biology Insights 2011:5 115-129
Original Research | Published on 21 Sep 2011



Developmental Regulation of Genes Encoding Universal Stress Proteins in Schistosoma mansoni
Raphael D. Isokpehi, Ousman Mahmud, Andreas N. Mbah, Shaneka S. Simmons, LĂ­via Avelar, Rajendram V. Rajnarayanan, Udensi K. Udensi, Wellington K. Ayensu, Hari H. Cohly, Shyretha D. Brown, Centdrika R. Dates, Sonya D. Hentz, Shawntae J. Hughes, Dominique R. Smith-McInnis, Carvey O. Patterson, Jennifer N. Sims, Kelisha T. Turner, Baraka S. Williams, Matilda O. Johnson, Taiwo Adubi, Judith V. Mbuh, Chiaka I. Anumudu, Grace O. Adeoye, Bolaji N. Thomas, Oyekanmi Nashiru and Guilherme Oliveira
Gene Regulation and Systems Biology 2011:5 61-74
Original Research | Published on 19 Sep 2011



Gene Networks Driving Bovine Mammary Protein Synthesis During the Lactation Cycle
Massimo Bionaz and Juan J. Loor
Bioinformatics and Biology Insights 2011:5 83-98
Original Research | Published on 04 May 2011



Gene Networks Driving Bovine Mammary Protein Synthesis During the Lactation Cycle
Massimo Bionaz and Juan J. Loor
Bioinformatics and Biology Insights 2011:5 83-98
Original Research | Published on 04 May 2011



Critical Self-Organized Self-Sustained Oscillations in Large Regulatory Networks: Towards Understanding the Gene Expression Initiation
Simon Rosenfeld
Gene Regulation and Systems Biology 2011:5 27-40
Original Research | Published on 22 Mar 2011



Cloning and Initial Functional Characterization of Mlk4α and Mlk4ß
Vladimir I. Kashuba, Elvira V. Grigorieva, Sergei M. Kvasha, Tatiana V. Pavlova, Vladimir Grigoriev, Alexei Protopopov, Olga Kharchenko, Rinat Gizatullin, Alla V. Rynditch and Eugene R. Zabarovsky
Genomics Insights 2011:4 1-12
Original Research | Published on 22 Mar 2011



Molecular Cloning of the Genes Encoding the PR55/Bβ/δ Regulatory Subunits for PP-2A and Analysis of Their Functions in Regulating Development of Goldfish, Carassius auratus
Jun-Qiong Zhao, Si-Si Xie, Wen-Bin Liu, Ya-Mei Xiao, Xiao-Ming Zeng, Mi Deng, Lili Gong, Jin-Ping Liu, Pei-Chao Chen, Jie Zhou, Xiao-Hui Hu, Jia-Han Lv, Xiang-Qian Yu, Dao Wang, Chi Li, Yun-Lei Peng, Gao-Peng Liao, Yun Liu and David Wan-Cheng Li
Gene Regulation and Systems Biology 2010:4 135-148
Original Research | Published on 20 Dec 2010



Alpha-Tocopherol Modulates Transcriptional Activities that Affect Essential Biological Processes in Bovine Cells
Cong-jun Li, Robert W. Li and Theodore H. Elsasser
Gene Regulation and Systems Biology 2010:4 109-124
Original Research | Published on 22 Nov 2010



Alpha-Tocopherol Modulates Transcriptional Activities that Affect Essential Biological Processes in Bovine Cells
Cong-jun Li, Robert W. Li and Theodore H. Elsasser
Gene Regulation and Systems Biology 2010:4 109-124
Original Research | Published on 22 Nov 2010



MicroRNA (miRNA) Expression is Regulated by Butyrate-Induced Epigenetic Modulation of Gene Expression in Bovine Cells
Cong-Jun Li, Robert W. Li and Theodore H. Elsasser
Genetics & Epigenetics 2010:3 23-32
Original Research | Published on 22 Nov 2010



MicroRNA (miRNA) Expression is Regulated by Butyrate-Induced Epigenetic Modulation of Gene Expression in Bovine Cells
Cong-Jun Li, Robert W. Li and Theodore H. Elsasser
Genetics & Epigenetics 2010:3 23-32
Original Research | Published on 22 Nov 2010



ESTs from Seeds to Assist the Selective Breeding of Jatropha curcas L. for Oil and Active Compounds
Kleber A. Gomes, Tiago C. Almeida, Abelmon S. Gesteira, Ivon P. Lôbo, Ana Carolina R. Guimarães, Antonio B. de Miranda, Marie-Anne Van Sluys, Rosenira S. da Cruz,  Júlio C.M. Cascardo and Nicolas Carels
Genomics Insights 2010:3 29-56
Original Research | Published on 28 Oct 2010



Interleukin 1 Beta Gene Polymorphism in Schizophrenia and Psychotic Depression
Ahmed Rady, Adel Elsheshai, Ibtisam Abdallah, Osama Elkholy and Heba Abou el Wafa
Gene Expression to Genetical Genomics 2010:3 7-12
Original Research | Published on 25 Oct 2010



EvoPipes.net: Bioinformatic Tools for Ecological and Evolutionary Genomics
Michael S. Barker, Katrina M. Dlugosch, Louie Dinh, R. Sashikiran Challa, Nolan C. Kane, Matthew G. King and Loren H. Rieseberg
Evolutionary Bioinformatics 2010:6 143-149
Short Report | Published on 20 Oct 2010



Molecular Cloning of a Novel Bradykinin-Related Peptide from the Skin of Indian Bronzed Frog Hylarana Temporalis
V. Reshmy, V. Preeji, A. Parvin, K. Santhoshkumar and S. George
Genomics Insights 2010:3 23-28
Short Report | Published on 18 Oct 2010



HO1 mRNA and Protein do not Change in Parallel in Bronchial Biopsies of Patients After Long Term Exposure to Sulfur Mustard
Mohammad Reza Nourani, Samaneh Yazdani, Mehryar Habibi Roudkenar, Majid Ebrahimi, Raheleh Halabian, Leila Mirbagheri, Mostafa Ghanei and Abbas Ali Imani Fooladi
Gene Regulation and Systems Biology 2010:4 83-90
Original Research | Published on 01 Oct 2010



On Robust State Estimation of Gene Networks
Chia-Hua Chuang and Chun-Liang Lin
Biomedical Engineering and Computational Biology 2010:2 23-36
Original Research | Published on 03 Sep 2010



Standardization of Gene Expression Quantification by Absolute Real-Time qRT-PCR System Using a Single Standard for Marker and Reference Genes
Yi-Hong Zhou, Vinay R. Raj, Eric Siegel and Liping Yu
Biomarker Insights 2010:5 79-85
Methodology | Published on 16 Aug 2010



No Association Between Visfatin (NAMPT) Gene Variants and Metabolic Traits in the Newfoundland Population
Jennifer L Shea, JC Loredo-Osti and Guang Sun
Genetics & Epigenetics 2010:3 15-22
Original Research | Published on 13 Aug 2010



Differential Transcriptional Changes in Mice Exposed to Chemically Distinct Diesel Samples
Tina Stevens, Susan Hester and M. Ian Gilmour
Biomedical Informatics Insights 2010:3 29-52
Original Research | Published on 12 Aug 2010



Dual KS: Defining Gene Sets with Tissue Set Enrichment Analysis
Yarong Yang, Eric J. Kort, Nader Ebrahimi, Zhongfa Zhang and Bin T. Teh
Cancer Informatics 2010:9 1-9
Methodology | Published on 21 Jan 2010



A Dynamic Neighboring Extension Search Algorithm  for Genome Coordinate Conversion in the Presence  of Short Sequence Duplications
Bin Zhu, Lu Jiang, George E. Liu
Gene Expression to Genetical Genomics 2009:2 29-36
Original Research | Published on 14 Jan 2010



Microarray Data Analysis of Gene Expression Evolution
Honghuang Lin
Gene Regulation and Systems Biology 2009:3 211-214
Short Commentary | Published on 27 Nov 2009



An Efficient Method to Identify Conditionally Activated Transcription Factors and their Corresponding Signal Transduction Pathway Segments
Haiyan Hu
Bioinformatics and Biology Insights 2009:3 179-187
Original Research | Published on 17 Nov 2009



Hereditary Inclusion Body Myopathy (HIBM2)
Chris M. Jay, Nick Levonyak, Gregory Nemunaitis, Phillip B. Maples and John Nemunaitis
Gene Regulation and Systems Biology 2009:3 181-190
Review | Published on 21 Oct 2009



Characteristics of Transcriptional Activity in Nonlinear Dynamics of Genetic Regulatory Networks
Simon Rosenfeld
Gene Regulation and Systems Biology 2009:3 159-179
Original Research | Published on 19 Oct 2009



Stochastic Spatio-Temporal Dynamic Model for Gene/Protein Interaction Network in Early Drosophila Development
Cheng-Wei Li and Bor-Sen Chen
Gene Regulation and Systems Biology 2009:3 191-210
Original Research | Published on 19 Oct 2009



Introductory Editorial (Biomedical Engineering and Computational Biology)
Kayvan Najarian
Biomedical Engineering and Computational Biology, 2009:1, 1-2
Editorial | Published on 15 Oct 2009



Evolution and Origin of HRS, a Protein Interacting with Merlin, the Neurofibromatosis 2 Gene Product
Leonid V. Omelyanchuk, Julia A. Pertseva, Sarah S. Burns and Long-Sheng Chang
Gene Regulation and Systems Biology 2009:3 143-157
Short Report | Published on 08 Oct 2009



Anatomical and Functional Organization of Inhibitory Circuits in the Songbird Auditory Forebrain
Jin Kwon Jeong, Liisa A. Tremere, Michael J. Ryave, Victor C. Vuong and Raphael Pinaud
Journal of Experimental Neuroscience 2009:2 43-53
Review | Published on 16 Sep 2009



Gene Expression Based Leukemia Sub‑Classification Using Committee Neural Networks
Mihir S. Sewak, Narender P. Reddy and Zhong-Hui Duan
Bioinformatics and Biology Insights 2009:3 89-98
Methodology | Published on 03 Sep 2009



The Bimodality Index: A Criterion for Discovering  and Ranking Bimodal Signatures from Cancer Gene Expression Profiling Data
Jing Wang, Sijin Wen, W. Fraser Symmans, Lajos Pusztai and Kevin R. Coombes
Cancer Informatics 2009:7 199-216
Original Research | Published on 05 Aug 2009



Evaluation of the Role of FGF23 in Mineral Metabolism
Hiroki Yokota, João F. Raposo, Andy Chen, Chang Jiang and Hugo G. Ferreira
Gene Regulation and Systems Biology 2009:3 131-142
Original Research | Published on 03 Aug 2009



affyPara - a Bioconductor Package for Parallelized Preprocessing Algorithms of Affymetrix Microarray Data
Markus Schmidberger, Esmeralda Vicedo and Ulrich Mansmann
Bioinformatics and Biology Insights 2009:3 83-87
Short Report | Published on 22 Jul 2009




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