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Bioinformatics

Range of open access peer reviewed Bioinformatics journals & associated research articles. Read full text articles or submit your research for publishing


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Results 750-791 of 791 for Bioinformatics

MapToGenome: A Comparative Genomic Tool that Aligns Transcript Maps to Sequenced Genomes
Srikrishna Putta, Jeramiah J. Smith, Chuck Staben and S. Randal Voss
Evolutionary Bioinformatics 2007:3 15-25
Published on 14 Feb 2007



MapToGenome: A Comparative Genomic Tool that Aligns Transcript Maps to Sequenced Genomes
Srikrishna Putta, Jeramiah J. Smith, Chuck Staben and S. Randal Voss
Evolutionary Bioinformatics 2007:3 15-25
Published on 14 Feb 2007



LASER: A Maximum Likelihood Toolkit for Detecting Temporal Shifts in Diversification Rates From Molecular Phylogenies
Daniel L. Rabosky
Evolutionary Bioinformatics 2006:2 247-250
Published on 14 Feb 2007



Spotlight on Cancer Informatics: Georgios S Stamatakos, PhD
Georgios S Stamatakos
Cancer Informatics 2006:2 83-86
Published on 13 Feb 2007



Total Evidence, Average Consensus and Matrix Representation with Parsimony: What a Difference Distances Make
Claudine Levasseur and François-Joseph Lapointe
Evolutionary Bioinformatics 2006:2 1-5
Published on 13 Feb 2007



PubMed QUEST: The PubMed Query Search Tool. An informatics tool to aid cancer centers and cancer investigators in searching the PubMed databases
David A. Hanauer and Arul M. Chinnaiyan
Cancer Informatics 2006:2 79-82
Published on 12 Feb 2007



Estimating Population Parameters using the Structured Serial Coalescent with Bayesian MCMC Inference when some Demes are Hidden
Greg Ewing and Allen Rodrigo
Evolutionary Bioinformatics 2006:2 227-235
Published on 12 Feb 2007



Applications of Machine Learning in Cancer Prediction and Prognosis
Joseph A. Cruz and David S. Wishart
Cancer Informatics 2006:2 59-77
Published on 11 Feb 2007



Unravelling Selection Shifts Among Foot-and-Mouth Disease Virus (FMDV) Serotypes
Damien C. Tully and Mario A. Fares
Evolutionary Bioinformatics 2006:2 211-225

Published on 11 Feb 2007



Data Mining for Gene Networks Relevant to Poor Prognosis in Lung Cancer via Backward-Chaining Rule Induction
Mary E. Edgerton, Douglas H. Fisher, Lianhong Tang, Lewis J. Frey and Zhihua Chen

Cancer Informatics 2007:3 93-114


Published on 10 Feb 2007

Computational Methods for the Analysis of Array Comparative Genomic Hybridization
Raj Chari, William W. Lockwood and Wan L. Lam
Cancer Informatics 2006:2 48-58
Published on 10 Feb 2007



PIRSF Family Classification System for Protein Functional and Evolutionary Analysis
Anastasia N. Nikolskaya, Cecilia N. Arighi, Hongzhan Huang, Winona C. Barker and Cathy H. Wu
Evolutionary Bioinformatics 2006:2 197-209
Published on 10 Feb 2007



Identification and Characterization of Renal Cell Carcinoma Gene Markers
Gul S. Dalgin, Dustin T. Holloway, Louis S. Liou and Charles DeLisi
Cancer Informatics 2007:3 65-92
Published on 09 Feb 2007



Multi-marker testing for cancer: what can we learn from modern prenatal testing for Trisomy-21
Erasmus Schneider and Gerald Mizejewski
Cancer Informatics 2006:2 44-47
Published on 09 Feb 2007



Spectral Analysis of Sequence Variability in Basic-Helix-loop-helix (bHLH) Protein Domains
Zhi Wang and William R. Atchley
Evolutionary Bioinformatics 2006:2 187-196
Published on 09 Feb 2007



CGHregions: Dimension Reduction for Array CGH Data with Minimal Information Loss
Mark A. van de Wiel and Wessel N. van Wieringen
Cancer informatics 2007:3 55-63
Published on 08 Feb 2007



aCGHViewer: A Generic Visualization Tool For aCGH data
Ganesh Shankar, Michael R. Rossi, Devin E. McQuaid, Jeffrey M. Conroy, Daniel G. Gaile, John K. Cowell, Norma J. Nowak, Ping Liang
Cancer Informatics 2006:2 36-43
Published on 08 Feb 2007



Gamma-Normal-Gamma Mixture Model for Detecting Differentially Methylated Loci in Three Breast Cancer Cell Lines
Abbas Khalili, Dustin Potter, Pearlly Yan, Lang Li, Joe Gray, Tim Huang and Shili Lin
Cancer Informatics 2007:3 43-54
Published on 07 Feb 2007



Bioinformatics resources for cancer research with an emphasis on gene function and structure prediction tools
Daisuke Kihara, Yifeng David Yang & Troy Hawkins
Cancer Informatics 2006:2 25-35
Published on 07 Feb 2007



CoMET: A Mesquite package for comparing models of continuous character evolution on phylogenies
Chunghau Lee, Sigal Blay, Arne Ø. Mooers, Ambuj Singh, Todd H. Oakley
Evolutionary Bioinformatics 2006:2 183-186
Published on 07 Feb 2007



Statistical Redundancy Testing for Improved Gene Selection in Cancer Classification Using Microarray Data
Simin Hu and J. Sunil Rao
Cancer Informatics 2007:3 29-41
Published on 06 Feb 2007



Cancer Informatics Vision: caBIG
Andrew C. von Eschenbach, M.D. and Kenneth Buetow, Ph.D.
Cancer Informatics 2006:2 22-24
Published on 06 Feb 2007



MBEToolbox 2.0: An enhanced version of a MATLAB toolbox for Molecular Biology and Evolution
James J. Cai, David K. Smith, Xuhua Xia and Kwok-yung Yuen
Evolutionary Bioinformatics 2006:2 179-182
Published on 06 Feb 2007



Identifying Biomarkers from Mass Spectrometry Data with Ordinal Outcome
Deukwoo Kwon, Mahlet G. Tadesse, Naijun Sha, Ruth M. Pfeiffer and Marina Vannucci
Cancer Informatics 2007:3 19-28
Published on 05 Feb 2007



Magellan: A Web Based System for the Integrated Analysis of Heterogeneous Biological Data and Annotations; Application to DNA Copy Number and Expression Data in Ovarian Cancer
Chris B. Kingsley, Wen-Lin Kuo, Daniel Polikoff, Andy Berchuck, Joe W. Gray, and Ajay N. Jain
Cancer Informatics 2006:2 10-21
Published on 05 Feb 2007



Modelling prokaryote gene content
Matthew Spencer, Edward Susko, and Andrew J. Roger
Evolutionary Bioinformatics 2006:2 157-178
Published on 05 Feb 2007



Analysis of Gene Expression Data Using BRB-Array Tools
Richard Simon, Amy Lam, Ming-Chung Li, Michael Ngan, Supriya Menenzes and Yingdong Zhao
Cancer Informatics 2007:3 11-17
Published on 04 Feb 2007



Spotlight on Cancer Informatics: Constantin Alifieris, M.D., Ph.D.
Constantin Alifieris
Cancer Informatics 2006:2 3-9
Published on 04 Feb 2007



Assessing the Applicability of the GTR Nucleotide Substitution Model Through Simulations
Laurent Gatto, Daniele Catanzaro and Michel C. Milinkovitch
Evolutionary Bioinformatics 2006:2 145-155
Published on 04 Feb 2007



Asterias: A Parallelized Web-based Suite for the Analysis of Expression and aCGH Data
Andreu Alibés, Edward R. Morrissey, Andrés Cañada, Oscar M. Rueda, David Casado, Patricio Yankilevich and Ramón Díaz-Uriarte
Cancer Informatics 2007:3 1-9
Published on 03 Feb 2007



Biomarker Development Study Publication Standards are Dead - Long Live Biomarker Development Study Publication Standards!
Dr James Lyons-Weiler
Cancer Informatics 2006:2 1-2
Published on 03 Feb 2007



Using minimum bootstrap support for splits to construct confidence regions for trees
Edward Susko
Evolutionary Bioinformatics 2006:2 129-143
Published on 03 Feb 2007



A new effective method for estimating missing values in the sequence data prior to phylogenetic analysis
Abdoulaye Baniré Diallo, François-Joseph Lapointe and Vladimir Makarenkov
Evolutionary Bioinformatics 2006:2 237-246
Published on 01 Feb 2007



3 UTR-located ALU Elements: Donors of Potetial miRNA Target Sites and Mediators of Network miRNA-based Regulatory Interactions
Evelina Daskalova, Vesselin Baev, Ventsislav Rusinov, and Ivan Minkov
Evolutionary Bioinformatics 2006:2 103-120
Published on 18 Jan 2007



Functionality and the evolution of marginal stability in proteins: Inferences from lattice simulations
Paul D. Williams, David D. Pollock and Richard A. Goldstein
Evolutionary Bioinformatics 2006:2 91-101
Published on 16 Jan 2007



Evolution, Bioinformatics and Evolutionary Bioinformatics Online
Dr Mark Pagel
Evolutionary Bioinformatics 2006:2 357-358
Published on 15 Jan 2007



Positional Homology in Bacterial Genomes
Ingrid J. Burgetz, Salimah Shariff, Andy Pang and Elisabeth R. M. Tillier
Evolutionary Bioinformatics 2006:2 77-90
Published on 14 Jan 2007



Sources of variation in ancestral sequence reconstruction for HIV-1 envelope genes
Howard A. Ross, David C. Nickle, Yi Liu, Laura Heath, Mark A. Jensen, Allen G. Rodrigo and James I. Mullins
Evolutionary Bioinformatics 2006:2 53-76
Published on 13 Jan 2007



Finding common protein interaction patterns across organisms
Mirco Gerke, Erich Bornberg-Bauer, Xiaoyi Jiang and Georg Fuellen
Evolutionary Bioinformatics 2006:2 45-52
Published on 12 Jan 2007



Coevolution of exploiter specialization and victim mimicry can be cyclic and saltational
Niclas Norrström, Wayne M. Getz, Noél M.A. Holmgren
Evolutionary Bioinformatics 2006:2 35-43
Published on 11 Jan 2007



The Bioinformatics of Integrative Medical Insights: Proposals for an International PsychoSocial and Cultural Bioinformatics Project
Ernest Rossi, Kathryn Rossi, Garret Yount, Mauro Cozzolino and Salvador Iannotti
Integrative Medicine Insights 2006:1 7-26
Published on 12 Sep 2006




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