Results 1-150 of 212 for Biology

Selective Regulation of Oocyte Meiotic Events Enhances Progress in Fertility Preservation Methods
Onder Celik, Nilufer Celik, Sami Gungor, Esra Tustas Haberal and Suleyman Aydin
Biochemistry Insights 2015:8 11-21
Review | Published on 20 Sep 2015

Arabinosylation Plays a Crucial Role in Extensin Cross-linking In Vitro
Yuning Chen, Wen Dong, Li Tan, Michael A. Held and Marcia J. Kieliszewski
Biochemistry Insights 2015:Suppl. 2 1-13
Original Research | Published on 20 Sep 2015

BioImg.org: A Catalog of Virtual Machine Images for the Life Sciences
Martin Dahlö, Frédéric Haziza, Aleksi Kallio, Eija Korpelainen, Erik Bongcam-Rudloff and Ola Spjuth
Bioinformatics and Biology Insights 2015:9 125-128
Technical Advance | Published on 10 Sep 2015

Combined Efficacy of Gallic Acid and MiADMSA with Limited Beneficial Effects Over MiADMSA Against Arsenic-induced Oxidative Stress in Mouse
Vidhu Pachauri and S.J.S. Flora
Biochemistry Insights 2015:8 1-10
Original Research | Published on 26 Aug 2015

Stem Cells and Progenitor Cells for Tissue-Engineered Solutions to Congenital Heart Defects
Yang Gao and Jeffrey G. Jacot
Biomarker Insights 2015:Suppl. 1 139-146
Review | Published on 26 Aug 2015

Introductory Editorial: Stem Cell Biology
David Brafman, Stuart Campbell, Albert Q. Lam, Jean J. Kim, Mehdi Nikkhah, Sarah Stabenfeldt
Biomarker Insights 2015:Suppl. 1 133-137
Editorial | Published on 23 Aug 2015

Antigenic Determinants of Possible Vaccine Escape by Porcine Circovirus Subtype 2b Viruses
Megan Constans, Marvin Ssemadaali, Oleksandr Kolyvushko and Sheela Ramamoorthy
Bioinformatics and Biology Insights 2015:Suppl. 2 1-12
Original Research | Published on 23 Aug 2015 | Video abstract

Use of Animal Models in Understanding Cancer-induced Bone Pain
Lauren M. Slosky, Tally M. Largent-Milnes and Todd W. Vanderah
Cancer Growth and Metastasis 2015:Suppl. 1 47-62
Review | Published on 23 Aug 2015 | Video abstract

Emerging and Evolving Ovarian Cancer Animal Models
Alexander S. Bobbs, Jennifer M. Cole and Karen D. Cowden Dahl
Cancer Growth and Metastasis 2015:Suppl. 1 29-36
Review | Published on 12 Aug 2015

Genome-wide Identification of WRKY Genes in the Desert Poplar Populus euphratica and Adaptive Evolution of the Genes in Response to Salt Stress
Jianchao Ma, Jing Lu, Jianmei Xu, Bingbing Duan, Xiaodong He and Jianquan Liu
Evolutionary Bioinformatics 2015:Suppl. 1 47-55
Review | Published on 05 Aug 2015

DNA Sequence Signatures for Rapid Detection of Six Target Bacterial Pathogens Using PCR Assays
Kenjiro Nagamine, Guo-Chiuan Hung, Bingjie Li and Shyh-Ching Lo
Microbiology Insights 2015:8 7-14
Original Research | Published on 23 Jul 2015

Resistance Level of Mosquito Species (Diptera: Culicidae) from Shandong Province, China
Hong-Mei Liu, Pei-Pei Yang, Peng Cheng, Hai-Fang Wang, Li-Juan Liu, Xiaodan Huang, Yu-Qiang Zhao, Huai-Wei Wang, Chong-Xing Zhang and Mao-Qing Gong
International Journal of Insect Science 2015:7 47-52
Original Research | Published on 19 Jul 2015

A Simple Rank Product Approach for Analyzing Two Classes
Tae Young Yang
Bioinformatics and Biology Insights 2015:9 119-123
Methodology | Published on 16 Jul 2015

Recent Advances in Chemoenzymatic Bioconjugation Methods
Jesse M. McFarland and David Rabuka
Organic Chemistry Insights 2015:5 7-14
Review | Published on 16 Jul 2015

Efficacy of Bacillus thuringiensis (var. kurstaki) Against Diamondback Moth (Plutella xylostella L.) Eggs and Larvae on Cabbage Under Semi-Controlled Greenhouse Conditions
Mitch M. Legwaila, David C. Munthali, Baone C. Kwerepe and Motshwari Obopile
International Journal of Insect Science 2015:7 39-45
Original Research | Published on 16 Jul 2015

Single and Multiple Gene Manipulations in Mouse Models of Human Cancer
Heather L. Lehman and Douglas B. Stairs
Cancer Growth and Metastasis 2015:Suppl. 1 1-15
Review | Published on 13 Jul 2015

Prediction of O-glycosylation Sites Using Random Forest and GA-Tuned PSO Technique
Hebatallah Hassan, Amr Badr and M. B. Abdelhalim
Bioinformatics and Biology Insights 2015:9 103-109
Original Research | Published on 05 Jul 2015

Melon Fly, Bactrocera cucurbitae (Diptera: Tephritidae), Infestation in Host Fruits in the Southwestern Islands of Japan Before the Initiation of Island-wide Population Suppression, as Recorded in Publications of Japanese Public Institutions
Grant T. McQuate and Tadashi Teruya
International Journal of Insect Science 2015:7 27-37
Review | Published on 07 Jun 2015 | Video abstract

Biomaterial Approaches for Stem Cell-Based Myocardial Tissue Engineering
Josh Cutts, Mehdi Nikkhah and David A. Brafman
Biomarker Insights 2015:Suppl. 1 77-90
Review | Published on 01 Jun 2015

Molecular Evolutionary Analysis of β-Defensin Peptides in Vertebrates
Jianbo Tu, Diyan Li, Qingqing Li, Long Zhang, Qing Zhu, Uma Gaur, Xiaolan Fan, Huailiang Xu, Yongfang Yao, Xiaoling Zhao and Mingyao Yang
Evolutionary Bioinformatics 2015:11 105-114
Original Research | Published on 01 Jun 2015

Differentiation of Cardiomyocytes from Human Pluripotent Stem Cells Using Monolayer Culture
Ivan Batalov and Adam W. Feinberg
Biomarker Insights 2015:Suppl. 1 71-76
Review | Published on 27 May 2015

Fungal Presence in Selected Tree Nuts and Dried Fruits
V.H. Tournas, N.S. Niazi and J.S. Kohn
Microbiology Insights 2015:8 1-6
Original Research | Published on 21 May 2015

Metagenomics: Tools and Insights for Analyzing Next-Generation Sequencing Data Derived from Biodiversity Studies
Anastasis Oulas, Christina Pavloudi, Paraskevi Polymenakou, Georgios A. Pavlopoulos, Nikolas Papanikolaou, Georgios Kotoulas, Christos Arvanitidis and Ioannis Iliopoulos
Bioinformatics and Biology Insights 2015:9 75-88
Review | Published on 05 May 2015

Reverse enGENEering of Regulatory Networks from Big Data: A Roadmap for Biologists
Xiaoxi Dong, Anatoly Yambartsev, Stephen A. Ramsey, Lina D Thomas, Natalia Shulzhenko and Andrey Morgun
Bioinformatics and Biology Insights 2015:9 61-74
Review | Published on 29 Apr 2015

An Interpretation of the Ancestral Codon from Miller's Amino Acids and Nucleotide Correlations in Modern Coding Sequences
Nicolas Carels and Miguel Ponce de Leon
Bioinformatics and Biology Insights 2015:9 37-47
Original Research | Published on 15 Apr 2015

Detection and Molecular Characterization of Potentially Pathogenic Free-living Amoebae from Water Sources in Kish Island, Southern Iran
Maryam Niyyati, Zohreh Lasgerdi and Jacob Lorenzo-Morales
Microbiology Insights 2015:Suppl. 1 1-6
Review | Published on 09 Apr 2015

The Roles of Neuregulin-1 in Cardiac Development, Homeostasis, and Disease
Cassady E. Rupert and Kareen L.K. Coulombe
Biomarker Insights 2015:Suppl. 1 1-9
Review | Published on 08 Apr 2015

Inhibition of Apoptosis and Efficacy of Pan Caspase Inhibitor, Q-VD-OPh, in Models of Human Disease
Chanel L.I. Keoni and Thomas L. Brown
Journal of Cell Death 2015:8 1-7
Review | Published on 08 Apr 2015

CNL Disease Resistance Genes in Soybean and Their Evolutionary Divergence
Madhav P. Nepal and Benjamin V. Benson
Evolutionary Bioinformatics 2015:11 49-63
Original Research | Published on 07 Apr 2015

Synonymous Codon Usage Bias in the Plastid Genome is Unrelated to Gene Structure and Shows Evolutionary Heterogeneity
Yueying Qi, Wenjing Xu, Tian Xing, Mingming Zhao, Nana Li, Li Yan, Guangmin Xia and Mengcheng Wang
Evolutionary Bioinformatics 2015:11 65-77
Original Research | Published on 07 Apr 2015

Free-radical Destruction of Sphingolipids Resulting in 2-hexadecenal Formation
Oleg Shadyro, Alexandra Lisovskaya, Galina Semenkova, Irina Edimecheva and Nadezda Amaegberi
Lipid Insights 2015:8 1-9
Original Research | Published on 25 Mar 2015

Oxidative Damaged Products, Level of Hydrogen Peroxide, and Antioxidant Protection in Diapausing Pupa of Tasar Silk Worm, Antheraea mylitta: A Comparative Study in Two Voltine Groups
Alpana Sahoo, Jagneshwar Dandapat and Luna Samanta
International Journal of Insect Science 2015:7 11-17
Original Research | Published on 05 Mar 2015

Molecular and Physiological Factors of Neuroprotection in Hypoxia-tolerant Models: Pharmacological Clues for the Treatment of Stroke
Thomas I. Nathaniel, Julius O. Soyinka, Adekunle Adedeji and Adebobola Imeh-Nathaniel
Journal of Experimental Neuroscience 2015:9 1-5
Review | Published on 26 Feb 2015

Identification and Expression Analysis of Ribosome Biogenesis Factor Co-orthologs in Solanum lycopersicum
Stefan Simm, Sotirios Fragkostefanakis, Puneet Paul, Mario Keller, Jens Einloft, Klaus-Dieter Scharf and  Enrico Schleiff
Bioinformatics and Biology Insights 2015:9 1-17
Original Research | Published on 09 Feb 2015

Assessment of Navel Oranges, Clementine Tangerines, and Rutaceous Fruits as Hosts of Bactrocera cucurbitae and Bactrocera latifrons (Diptera: Tephritidae)
Grant T. McQuate, Peter A. Follett, Nicanor J. Liquido and Charmaine D. Sylva
International Journal of Insect Science 2015:7 1-9
Original Research | Published on 29 Jan 2015 | Video abstract | Highly accessed (previous month)

POEAS: Automated Plant Phenomic Analysis Using Plant Ontology
Khader Shameer, Mahantesha BN Naika, Oommen K. Mathew, and Ramanathan Sowdhamini
Bioinformatics and Biology Insights 2014:8 209-214
Original Research | Published on 21 Dec 2014

Activity of the Antioxidant Defense System in a Typical Bioinsecticide- and Synthetic Insecticide-treated Cowpea Storage Beetle Callosobrochus maculatus F. (Coleoptera: Chrysomelidae)
Ayodele O. Kolawole, Folasade M. Olajuyigbe, Joshua O. Ajele and Chris O. Adedire
International Journal of Insect Science 2014:6 99-108
Original Research | Published on 21 Dec 2014

A Hypothetical Protein of Alteromonas macleodii AltDE1 (amad1_06475) Predicted to be a Cold-Shock Protein with RNA Chaperone Activity
Arafat Rahman Oany, Shah Adil Ishtiyaq Ahmad, KM Kaderi Kibria, Mohammad Uzzal Hossain and Tahmina Pervin Jyoti
Gene Regulation and Systems Biology 2014:8 141-147
Original Research | Published on 18 Dec 2014

Kissing Bugs in the United States: Risk for Vector-Borne Disease in Humans
Stephen A. Klotz, Patricia L. Dorn, Mark Mosbacher and Justin O. Schmidt
Environmental Health Insights 2014:Suppl. 2 49-59
Review | Published on 10 Dec 2014

Effects of Delayed Mating and Access to Water on Oviposition and Longevity in Female Amyelois transitella
Charles S. Burks
International Journal of Insect Science 2014:6 89-98
Original Research | Published on 08 Dec 2014

Contact-dependent Signaling
Carl Denef
Cell Communication Insights 2014:6 1-11
Review | Published on 03 Dec 2014

Nanotechnology in the Regeneration of Complex Tissues
John W. Cassidy
Bone and Tissue Regeneration Insights 2014:5 25-35
Review | Published on 12 Nov 2014

Cloning and Expression Profiling of the Polycomb Gene, Retinoblastoma-related Protein from Tomato Solanum lycopersicum L.
Zainab M. Almutairi and Monther T. Sadder
Evolutionary Bioinformatics 2014:10 177-185
Original Research | Published on 23 Oct 2014

Insecticides and Bio-insecticides Modulate the Glutathione-related Antioxidant Defense System of Cowpea Storage Bruchid (Callosobruchus maculatus)
Ayodele O. Kolawole and Adejoke N. Kolawole
International Journal of Insect Science 2014:6 79-88
Original Research | Published on 19 Oct 2014

Optogenetic Control of Apoptosis in Targeted Tissues of Xenopus laevis Embryos
Kyle Jewhurst, Michael Levin and Kelly A. McLaughlin
Journal of Cell Death 2014:7 25-31
Methodology | Published on 13 Oct 2014

Impact of the Argemone mexicana Stem Extracts on the Reproductive Fitness and Behavior of Adult Dengue Vector, Aedes aegypti L. (Diptera: Culicidae)
Radhika Warikoo and Sarita Kumar
International Journal of Insect Science 2014:6 71-78
Original Research | Published on 12 Oct 2014

Interactions Among Plant Transcription Factors Regulating Expression of Stress-responsive Genes
Sony Malhotra and R. Sowdhamini
Bioinformatics and Biology Insights 2014:8 193-198
Original Research | Published on 10 Sep 2014

Limitations of Using Propidium Monoazide with qPCR to Discriminate between Live and Dead Legionella in Biofilm Samples
Michael J. Taylor, Richard H. Bentham and Kirstin E. Ross
Microbiology Insights 2014:7 15-24
Original Research | Published on 04 Sep 2014

Correction to “Estimation of Fitness of Normal and Stylopized Paddy Pest, White Leafhopper Cofana spectra (Distant) (Hemiptera: Cicadellidae), in West Bengal, India through Correlation of Life History Traits”
Sangita Mitra, Rupa Harsha, Niladri Hazra and Abhijit Mazumdar
International Journal of Insect Science 2014:6 69-69
Correction | Published on 04 Sep 2014

Immunobiology of Spermatozoa: A Review
Gaurav Singhal
Reproductive Biology Insights 2014:7 17-28
Review | Published on 17 Aug 2014

Potential Positive Effects of Pesticides Application on Sesamia inferens (Walker) (Lepidoptera: Insecta)
Guo-qing Yang, Shang-Gen Du, Li Li, Li-Ben Jiang and Jin-cai Wu
International Journal of Insect Science 2014:6 61-67
Original Research | Published on 05 Aug 2014

The Developmental Biology of Grain-Sucking Bug, Stenocoris elegans Blöte, on Upland Rice
Olaniyi Thomas Alamu and Francis Kolawole Ewete
International Journal of Insect Science 2014:6 57-60
Original Research | Published on 30 Jun 2014

Influence of Modularity and Regularity on Disparity of Atelostomata Sea Urchins
Juan López-Sauceda, Juan Malda-Barrera, Alfredo Laguarda-Figueras, Francisco Solís-Marín and José L. Aragón
Evolutionary Bioinformatics 2014:10 97-105
Original Research | Published on 29 Jun 2014

Identification of Chicken Pulmonary miRNAs Targeting PB1, PB1-F2, and N40 Genes of Highly Pathogenic Avian Influenza Virus H5N1 In Silico
Amod Kumar, Muhasin Asaf V.N., Ashwin Ashok Raut, Richa Sood and Anamika Mishra
Bioinformatics and Biology Insights 2014:8 135-145
Original Research | Published on 12 Jun 2014

DOR – a Database of Olfactory Receptors – Integrated Repository for Sequence and Secondary Structural Information of Olfactory Receptors in Selected Eukaryotic Genomes
Balasubramanian Nagarathnam, Snehal D. Karpe, Krishnan Harini, Kannan Sankar, Mohammed Iftekhar, Durairaj Rajesh, Sadasivam Giji, Govidaraju Archunan, Veluchamy Balakrishnan, M. Michael Gromiha, Wataru Nemoto, Kazhuhiko Fukui and Ramanathan Sowdhamini
Bioinformatics and Biology Insights 2014:8 147-158
Original Research | Published on 12 Jun 2014

Expression of Glycosyltransferases; ST3GAL1, FUT3, FUT5, and FUT6 Transcripts in Oral Cancer
Bhairavi N. Vajaria, Kinjal R. Patel, Rasheedunnisa Begum, Franky D. Shah, Jayendra B. Patel, Geeta M. Joshi and Prabhudas S. Patel
Glycobiology Insights 2014:4 7-14
Original Research | Published on 09 Jun 2014

High-throughput Methods Redefine the Rumen Microbiome and Its Relationship with Nutrition and Metabolism
Joshua C. McCann, Tryon A. Wickersham and Juan J. Loor
Bioinformatics and Biology Insights 2014:8 109-125
Review | Published on 08 Jun 2014

Herbivore Biodiversity Varies with Patch Size in an Urban Archipelago
Robert F. Bode and Ashleigh Maciejewski
International Journal of Insect Science 2014:6 49-55
Original Research | Published on 20 May 2014

Design Strategies of Biodegradable Scaffolds for Tissue Regeneration
Khalil N. Bitar and Elie Zakhem
Biomedical Engineering and Computational Biology 2014:6 13-20
Review | Published on 08 May 2014

Horn Fly, Haematobia irritans irritans (L.), Overwintering
Allan T. Showler, Weste L.A. Osbrink and Kimberly H. Lohmeyer
International Journal of Insect Science 2014:6 43-47
Short Review | Published on 01 May 2014

Promise and Reality in the Expanding Field of Network Interaction Analysis: Metabolic Networks
Susanna Bazzani
Bioinformatics and Biology Insights 2014:8 83-91
Commentary | Published on 16 Apr 2014

Overfeeding Dairy Cattle During Late-Pregnancy Alters Hepatic PPARα-Regulated Pathways Including Hepatokines: Impact on Metabolism and Peripheral Insulin Sensitivity
M. Jawad Khan, Carolina B. Jacometo, Daniel E. Graugnard, Marcio N. Corrêa, Eduardo Schmitt, Felipe Cardoso and Juan J. Loor
Gene Regulation and Systems Biology 2014:8 97-111
Original Research | Published on 03 Apr 2014

TreSpEx—Detection of Misleading Signal in Phylogenetic Reconstructions Based on Tree Information
Torsten H. Struck
Evolutionary Bioinformatics 2014:10 51-67
Original Research | Published on 31 Mar 2014

An In Silico Approach for Characterization of an Aminoglycoside Antibiotic-Resistant Methyltransferase Protein from Pyrococcus furiosus (DSM 3638)
Arafat Rahman Oany, Tahmina Pervin Jyoti and Shah Adil Ishtiyaq Ahmad
Bioinformatics and Biology Insights 2014:8 65-72
Original Research | Published on 20 Mar 2014

Estimation of Fitness of Normal and Stylopized Paddy Pest, White Leafhopper Cofana spectra (Distant) (Hemiptera: Cicadellidae), in West Bengal, India through Correlation of Life History Traits
Sangita Mitra, Rupa Harsha, Niladri Hazra and Abhijit Mazumdar
International Journal of Insect Science 2014:6 33-42
Original Research | Published on 18 Mar 2014

Antibiofilm Efficacy of DispersinB® Wound Spray Used in Combination with a Silver Wound Dressing
Purushottam V. Gawande, Allie P. Clinton, Karen LoVetri, Nandadeva Yakandawala, Kendra P. Rumbaugh and Srinivasa Madhyastha
Microbiology Insights 2014:7 9-13
Original Research | Published on 05 Mar 2014

Genome-wide Identification and Characterization of Transcription Factor Binding Motifs of NBS-LRR Genes in Rice and Arabidopsis
Gandhimani Ramkumar, Maganti S. Madhav, Akshaya K. Biswal, S.J.S. Rama Devi, Kannabiran Sakthivel, Madhan K. Mohan, B. Umakanth, Satendra K. Mangrauthia, Raman M. Sundaram and Basavaraj C. Viraktamath
Journal of Genomes and Exomes 2014:3 7-15
Original Research | Published on 26 Feb 2014

Postpartal Subclinical Endometritis Alters Transcriptome Profiles in Liver and Adipose Tissue of Dairy Cows
Haji Akbar, Felipe C. Cardoso, Susanne Meier, Christopher Burke, Scott McDougall, Murray Mitchell, Caroline Walker, Sandra L. Rodriguez-Zas, Robin E. Everts, Harris A. Lewin, John R. Roche and Juan J. Loor
Bioinformatics and Biology Insights 2014:8 45-63
Original Research | Published on 19 Feb 2014

Impact of Day Intervals on Sequential Infestations of the Rice Leaffolder Cnaphalocrocis medinalis (Guenée) (Lepidoptera: Pyralidae) and the White-Backed Rice Planthopper Sogatella furcifera (Horváth) on Rice Grain Damage
Li-Ben Jiang, Jia Cheng, Zhan-Fei Zhu, Lin-Quan Ge, Guo-Qing Yang and Jin-Cai Wu
International Journal of Insect Science 2014:6 23-31
Original Research | Published on 19 Feb 2014

Inhibition of Batrachochytrium dendrobatidis Caused by Bacteria Isolated from the Skin of Boreal Toads, Anaxyrus (Bufo) boreas boreas, from Grand Teton National Park, Wyoming, USA
Shawna T. Park, Amanda M. Collingwood, Sophie St-Hilaire and Peter P. Sheridan
Microbiology Insights 2014:7 1-8
Original Research | Published on 18 Feb 2014

Probing the Unknowns in Cytokinin-Mediated Immune Defense in Arabidopsis with Systems Biology Approaches
Muhammad Naseem, Meik Kunz and Thomas Dandekar
Bioinformatics and Biology Insights 2014:8 35-44
Methodology | Published on 13 Feb 2014

Regulation of Ku70-Bax Complex in Cells
Manila Hada and Roland P.S. Kwok
Journal of Cell Death 2014:7 11-13
Perspective | Published on 13 Feb 2014

Stem Cells: The Future of Personalised Medicine?
Ahmer Irfan and Irfan Ahmed
Medical Equipment Insights 2014:5 1-7
Review | Published on 10 Feb 2014

Effectiveness of Spinosad Against Diamondback Moth (Plutella xylostella L.) Eggs and Larvae on Cabbage Under Botswana Conditions
Mitch M. Legwaila, David C. Munthali, Motshwari Obopile and Baone C. Kwerepe
International Journal of Insect Science 2014:6 15-21
Original Research | Published on 02 Feb 2014

Efficacy of a Combined Treatment of Neem Oil Formulation and Endosulfan Against Helicoverpa armigera (Hub.) (Lepidoptera: Noctuidae)
Abdul Rashid War, Michael Gabriel Paulraj, Barkat Hussain, Tariq Ahmad, Mohd Yousf War and Savarimuthu Ignacimuthu
International Journal of Insect Science 2014:6 1-7
Original Research | Published on 20 Jan 2014

Structure, Composition, and Properties of Silk from the African Wild Silkmoth, Anaphe panda (Boisduval) (Lepidoptera: Thaumetopoeidae)
Addis T. Kebede, Suresh K. Raina and Jacques M. Kabaru
International Journal of Insect Science 2014:6 9-14
Original Research | Published on 19 Jan 2014

Central Role of the PPARγ Gene Network in Coordinating Beef Cattle Intramuscular Adipogenesis in Response to Weaning Age and Nutrition
Sonia J. Moisá, Daniel W. Shike, Dan B. Faulkner, William T. Meteer, Duane Keisler and Juan J. Loor
Gene Regulation and Systems Biology 2014:8 17-32
Original Research | Published on 08 Jan 2014

Oocyte-Somatic Cell Interactions and Ovulation Rate: Effects on Oocyte Quality and Embryo Yield
Kenneth P. McNatty, Jennifer L. Juengel and Janet L. Pitman
Reproductive Biology Insights 2014:7 1-8
Review | Published on 02 Jan 2014

Three Dimensional Structure Prediction of Fatty Acid Binding Site on Human Transmembrane Receptor CD36
Zineb Tarhda, Oussama Semlali, Anas Kettani, Ahmed Moussa, Nada A. Abumrad and Azeddine Ibrahimi
Bioinformatics and Biology Insights 2013:7 369-373
Original Research | Published on 02 Dec 2013

Computational Identification of MicroRNAs from the Expressed Sequence Tags of Toxic Dinofiagellate Alexandrium Tamarense
Dahai Gao, Limei Qiu, Zhanhui Hou, Qingchun Zhang, Jianmin Wu, Qiang Gao and Linsheng Song
Evolutionary Bioinformatics 2013:9 479-485
Original Research | Published on 20 Nov 2013

Study of Stress Induced Failure of the Blood-gas Barrier and the Epithelial-epithelial Cells Connections of the Lung of the Domestic Fowl, Gallus gallus Variant Domesticus after Vascular Perfusion
John N. Maina and Sikiru A. Jimoh
Biomedical Engineering and Computational Biology 2013:5 77-88
Original Research | Published on 20 Nov 2013

Population Dynamics of the Mediterranean Fruit Fly in Montenegro
Sanja Radonjić, Miroslav Čizmović and Rui Pereira
International Journal of Insect Science 2013:5 35-40
Original Research | Published on 05 Nov 2013

PhyloTreePruner: A Phylogenetic Tree-Based Approach for Selection of Orthologous Sequences for Phylogenomics
Kevin M. Kocot, Mathew R. Citarella, Leonid L. Moroz and Kenneth M. Halanych
Evolutionary Bioinformatics 2013:9 429-435
Methodology | Published on 29 Oct 2013

Current Understanding of the Mechanisms for Clearance of Apoptotic Cells—A Fine Balance
Lois A. Hawkins and Andrew Devitt
Journal of Cell Death 2013:6 57-68
Review | Published on 23 Oct 2013

Automatic Identification of Algal Community from Microscopic Images
Natchimuthu Santhi, Chinnaraj Pradeepa, Parthasarathy Subashini and Senthil Kalaiselvi
Bioinformatics and Biology Insights 2013:7 327-334
Original Research | Published on 10 Oct 2013

Identification, Nomenclature, and Evolutionary Relationships of Mitogen-Activated Protein Kinase (MAPK) Genes in Soybean
Achal Neupane, Madhav P. Nepal, Sarbottam Piya, Senthil Subramanian, Jai S. Rohila, R. Neil Reese and Benjamin V. Benson
Evolutionary Bioinformatics 2013:9 363-386
Original Research | Published on 22 Sep 2013

The Kynurenine Pathway in Stem Cell Biology
Simon P. Jones, Gilles J. Guillemin and Bruce J. Brew
International Journal of Tryptophan Research 2013:6 57-66
Review | Published on 15 Sep 2013

Identification of Signaling Protein Complexes by Parallel Affinity Precipitation Coupled with Mass Spectrometry
Heng Lu, Qishan Lin and Jihe Zhao
Cell Communication Insights 2013:5 1-7
Methodology | Published on 11 Sep 2013

Experimental Implantation Trials of Xenopsylla cunicularis Smit (Siphonaptera: Pulicidae) in Northern France with the Objective to Use it as Vaccine Vector
Anne Darries-Vallier, Aurélien Ausset and Pierre Besrest
International Journal of Insect Science 2013:5 21-34
Original Research | Published on 08 Sep 2013

Analysis of Protein Thermostability Enhancing Factors in Industrially Important Thermus Bacteria Species
Benjamin Kumwenda, Derek Litthauer, Özlem Tastan Bishop, and Oleg Reva
Evolutionary Bioinformatics 2013:9 327-342
Original Research | Published on 18 Aug 2013

Bacterial Ccommunity Structure and Composition in Soils Under Industrial Poultry Production Activities: An Observational Study
Raymon S. Shange, Ramble O. Ankumah, Robert Zabawa and Scot E. Dowd
Air, Soil and Water Research 2013:6 91-101
Original Research | Published on 22 Jul 2013

Molecular Approaches to the Identification of Pathogenic and Nonpathogenic Listeriae
Dongyou Liu
Microbiology Insights 2013:6 59-69
Review | Published on 22 Jul 2013

Monoclonal Antibodies: A Tool in Clinical Research
Waliza Ansar and Shyamasree Ghosh
Indian Journal of Clinical Medicine 2013:4 9-21
Consise Review | Published on 22 Jul 2013

Bioinformatics and Gene Network Analyses of the Swine Mammary Gland Transcriptome during Late Gestation
Wangsheng Zhao, Khuram Shahzad, Mingfeng Jiang, Daniel E. Graugnard, Sandra L. Rodriguez-Zas, Jun Luo, Juan J. Loor and Walter L. Hurley
Bioinformatics and Biology Insights 2013:7 193-216
Original Research | Published on 14 Jul 2013

Spatial Arrangement of Legionella Colonies in Intact Biofilms from a Model Cooling Water System
Michael Taylor, Kirstin Ross and Richard Bentham
Microbiology Insights 2013:6 49-57
Original Research | Published on 04 Jul 2013 | Video abstract

Unexplored Potentials of Epigenetic Mechanisms of Plants and Animals—Theoretical Considerations
Istvan Seffer, Zoltan Nemeth, Gyula Hoffmann, Robert Matics, A. Gergely Seffer and Akos Koller
Genetics & Epigenetics 2013:5 23-41
Review | Published on 30 Jun 2013

Biochemical Characteristics of Organic Matter in a Guano Concretion of Late Miocene or Pliocene Age from Manchester Parish in Jamaica
Adrian Spence, Richard E. Hanson, Toni Johnson, Claion Robinson and Richard N. Annells
Analytical Chemistry Insights 2013:8 41-52
Original Research | Published on 18 Jun 2013

rbrothers: R Package for Bayesian Multiple Change-Point Recombination Detection
Jan Irvahn, Sujay Chattopadhyay, Evgeni V. Sokurenko and Vladimir N. Minin
Evolutionary Bioinformatics 2013:9 235-238
Rapid Communication | Published on 12 Jun 2013

New Biosynthesis and Biological Actions of Avian Neurosteroids
Kazuyoshi Tsutsui, Shogo Haraguchi, Kazuhiko Inoue, Hitomi Miyabara, Takayoshi Ubuka, Megumi Hatori, Tsuyoshi Hirota, and Yoshitaka Fukada
Journal of Experimental Neuroscience 2013:7 15-29
Review | Published on 27 May 2013

The Aquaporin Channel Repertoire of the Tardigrade Milnesium tardigradum
Markus A. Grohme, Brahim Mali, Weronika Welnicz, Stephanie Michel, Ralph O. Schill and Marcus Frohme
Bioinformatics and Biology Insights 2013:7 153-165
Original Research | Published on 26 May 2013

Analysis of Synonymous Codon Usage Patterns in Seven Different Citrus Species
Chen Xu, Jing Dong, Chunfa Tong, Xindong Gong, Qiang Wen and Qiang Zhuge
Evolutionary Bioinformatics 2013:9 215-228
Original Research | Published on 23 May 2013

Investigation of dmyc Promoter and Regulatory Regions
Jasmine Kharazmi and Cameron Moshfegh
Gene Regulation and Systems Biology 2013:7 85-102
Original Research | Published on 15 May 2013

Molecular Approach to Microbiological Examination of Water Quality in the Grand Bay National Estuarine Research Reserve (NERR) in Mississippi, USA
Stephen S. Kishinhi, Paul B. Tchounwou and Ibrahim O. Farah
Environmental Health Insights 2013:7 33-41
Original Research | Published on 15 May 2013

The Use of Metagenomic Approaches to Analyze Changes in Microbial Communities
Girish Neelakanta and Hameeda Sultana
Microbiology Insights 2013:6 37-48
Review | Published on 16 Apr 2013

An Empirical Muscle Intracellular Action Potential Model with Multiple Erlang Probability Density Functions based on a Modified Newton Method
Gyutae Kim, Mohammed M. Ferdjallah and Frederic D. McKenzie
Biomedical Engineering and Computational Biology 2013:5 33-42
Original Research | Published on 14 Apr 2013

Cultivation Conditions for Phytase Production from Recombinant Escherichia coli DH5α
Rafidah Mohd Ariff, Anwar Fitrianto, Mohd Yazid Abd. Manap, Aini Ideris, Azhar Kassim, Afinah Suhairin and Anis Shobirin Meor Hussin
Microbiology Insights 2013:6 17-28
Original Research | Published on 09 Apr 2013

Ovarian Stem Cells-the Pros and Cons
Ayelet Evron and Zeev Blumenfeld
Clinical Medicine Insights: Reproductive Health 2013:7 43-47
Perspective | Published on 20 Mar 2013

Integrative Approach for Computationally Inferring Interactions between the Alpha and Beta Subunits of the Calcium-Activated Potassium Channel (BK): a Docking Study
Janneth González, Angela Gálvez, Ludis Morales, George E. Barreto, Francisco Capani, Omar Sierra and Yolima Torres
Bioinformatics and Biology Insights 2013:7 73-82
Original Research | Published on 27 Feb 2013

A Unifying Mathematical Framework for Genetic Robustness, Environmental Robustness, Network Robustness and their Trade-off on Phenotype Robustness in Biological Networks Part I: Gene Regulatory Networks in Systems and Evolutionary Biology
Bor-Sen Chen and Ying-Po Lin
Evolutionary Bioinformatics 2013:9 43-68
Original Research | Published on 26 Feb 2013

A Unifying Mathematical Framework for Genetic Robustness, Environmental Robustness, Network Robustness and their Tradeoff on Phenotype Robustness in Biological Networks Part II: Ecological Networks
Bor-Sen Chen and Ying-Po Lin
Evolutionary Bioinformatics 2013:9 69-85
Original Research | Published on 26 Feb 2013

A Unifying Mathematical Framework for Genetic Robustness, Environmental Robustness, Network Robustness and their Trade-offs on Phenotype Robustness in Biological Networks. Part III: Synthetic Gene Networks in Synthetic Biology
Bor-Sen Chen and Ying-Po Lin
Evolutionary Bioinformatics 2013:9 87-109
Original Research | Published on 26 Feb 2013

Global Consensus Theorem and Self-Organized Criticality: Unifying Principles for Understanding Self-Organization, Swarm Intelligence and Mechanisms of Carcinogenesis
Simon Rosenfeld
Gene Regulation and Systems Biology 2013:7 23-39
Perspective | Published on 20 Feb 2013

Distribution and Extent of Cotesia Flavipes Cameron (Hymenoptera: Braconidae) Parasitism in Northeastern Ethiopia
Asmare Dejen, Emana Getu, Ferdu Azerefegne and Amare Ayalew
International Journal of Insect Science 2013:5 9-19
Original Research | Published on 31 Jan 2013

Fungal Exopolysaccharide: Production, Composition and Applications
Subhadip Mahapatra and Debdulal Banerjee
Microbiology Insights 2013:6 1-16
Review | Published on 29 Jan 2013

A Statistical Method without Training Step for the Classification of Coding Frame in Transcriptome Sequences
Nicolas Carels and Diego Frias
Bioinformatics and Biology Insights :7 35-54
Original Research | Published on 23 Jan 2013

Nest Architectural Patterns by Three Wasp Species (Vespa velutina, Polistes flavus and Sceliphron formosum) with Reference to Their Behavior
Farzana Perveen and Muzafar Shah
International Journal of Insect Science 2013:5 1-8
Original Research | Published on 09 Jan 2013

Methods of Combinatorial Optimization to Reveal Factors Affecting Gene Length
Alexander Bolshoy, and Tatiana Tatarinova
Bioinformatics and Biology Insights 2012:6 317-327
Original Research | Published on 10 Dec 2012

Analyzing Thiol-Dependent Redox Networks in the Presence of Methylene Blue and Other Antimalarial Agents with RT-PCR- Supported in silico Modeling
J. Zirkel, A. Cecil, F. Schäfer, S. Rahlfs, A. Ouedraogo, K. Xiao, S. Sawadogo, B. Coulibaly, K. Becker and T. Dandekar
Bioinformatics and Biology Insights 2012:6 287-302
Original Research | Published on 03 Dec 2012

Functional Annotation Analytics of Bacillus Genomes Reveals Stress Responsive Acetate Utilization and Sulfate Uptake in the Biotechnologically Relevant Bacillus megaterium
Baraka S. Williams, Raphael D. Isokpehi, Andreas N. Mbah, Antoinesha L. Hollman, Christina O. Bernard, Shaneka S. Simmons, Wellington K. Ayensu and Bianca L. Garner
Bioinformatics and Biology Insights 2012:6 275-286
Original Research | Published on 21 Nov 2012

A Fast Quad-Tree Based Two Dimensional Hierarchical Clustering
Priscilla Rajadurai and Swamynathan Sankaranarayanan
Bioinformatics and Biology Insights 2012:6 265-274
Original Research | Published on 19 Nov 2012

Homology Modeling and Molecular Dynamics Simulation Studies of a Marine Alkaline Protease
Xiaofeng Ji, Wei Wang, Yuan Zheng, Jianhua Hao and Mi Sun
Bioinformatics and Biology Insights 2012:6 255-263
Original Research | Published on 19 Nov 2012

Myosinome: A Database of Myosins from Select Eukaryotic Genomes to Facilitate Analysis of Sequence-Structure-Function Relationships
Divya P. Syamaladevi, Margaret S Sunitha, S. Kalaimathy, Chandrashekar C. Reddy, Mohammed Iftekhar, Shaik N. Pasha and R. Sowdhamini
Bioinformatics and Biology Insights 2012:6 247-254
Original Research | Published on 12 Nov 2012

BioNetwork Bench: Database and Software for Storage, Query, and Analysis of Gene and Protein Networks
Oksana Kohutyuk, Fadi Towfic, M. Heather West Greenlee and Vasant Honavar
Bioinformatics and Biology Insights 2012:6 235-246
Software or database review | Published on 08 Nov 2012

Plant-based Paste Fermented by Lactic Acid Bacteria and Yeast: Functional Analysis and Possibility of Application to Functional Foods
Shinsuke Kuwaki, Nobuyoshi Nakajima, Hidehiko Tanaka and Kohji Ishihara
Biochemistry Insights 2012:5 21-29
Original Research | Published on 31 Oct 2012

Newton, Laplace, and The Epistemology of Systems Biology
Michael L. Bittner and Edward R. Dougherty
Cancer Informatics 2012:11 185-190
Perspective | Published on 30 Oct 2012

The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation
Santi Nurbaiti, Muhamad A. Martoprawiro, Akhmaloka and Rukman Hertadi
Bioinformatics and Biology Insights 2012:6 225-234
Original Research | Published on 30 Oct 2012

FOXO1 Up-Regulates Human L-selectin Expression Through Binding to a Consensus FOXO1 Motif
Yuefen Lou, Xiaojiong Lu and Xitong Dang
Gene Regulation and Systems Biology 2012:6 139-149
Original Research | Published on 29 Oct 2012

Drug Target Exploitable Structural Features of Adenylyl Cyclase Activity in Schistosoma mansoni
Andreas N. Mbah, Henri L. Kamga, Omotayo R. Awofolu and Raphael D. Isokpehi
Drug Target Insights 2012:6 41-58
Original Research | Published on 24 Oct 2012

Immune Modulatory Responses of Mesenchymal Stem Cells from Different Sources in Cultures and In Vivo
K. Thejaswi, M. Amarnath, G. Srinivas, MK Jerald, T. Avinash Raj and S. Singh
Cell & Tissue Transplantation & Therapy 2012:4 1-13
Original Research | Published on 09 Oct 2012

Integrative Structural Modelling of the Cardiac Thin Filament: Energetics at the Interface and Conservation Patterns Reveal a Spotlight on Period 2 of Tropomyosin
Margaret Sunitha S, John A. Mercer, James A. Spudich, and Ramanathan Sowdhamini
Bioinformatics and Biology Insights 2012:6 203-223
Original Research | Published on 03 Oct 2012 | Video abstract

A Next-Generation Sequencing Approach to Study the Transcriptomic Changes During the Differentiation of Physarum at the Single-Cell Level
Israel Barrantes, Jeremy Leipzig and Wolfgang Marwan
Gene Regulation and Systems Biology 2012:6 127-137
Original Research | Published on 01 Oct 2012

The Core Mouse Response to Infection by Neospora Caninum Defined by Gene Set Enrichment Analyses
John Ellis, Stephen Goodswen, Paul J Kennedy and Stephen Bush
Bioinformatics and Biology Insights 2012:6 187-202
Original Research | Published on 03 Sep 2012

Chemo-Enzymatic Synthesis of Ester-Linked 2-Phenylindole-3-Carboxaldehyde-Monosaccharide Conjugate as Potential Prodrug
Kei Shimoda, Manabu Hamada, Hiroshi Yokoi and Hiroki Hamada
Biochemistry Insights 2012:5 17-20
Original Research | Published on 27 Aug 2012

Cell Communication Insights Redux: Passing of the Torch
Paul J. Higgins
Cell Communication Insights 2012:4 1-2
Editorial | Published on 16 Aug 2012

Simultaneous Analysis of Common and Rare Variants in Complex Traits: Application to SNPs (SCARVAsnp)
Guanjie Chen, Ao Yuan, Yanxun Zhou, Amy R. Bentley, Jie Zhou, Weiping Chen, Daniel Shriner, Adebowale Adeyemo and Charles N. Rotimi
Bioinformatics and Biology Insights 2012:6 177-185
Methodology | Published on 31 Jul 2012

A Comparative Approach to Hand Force Estimation using Artificial Neural Networks
Farid Mobasser and Keyvan Hashtrudi-Zaad
Biomedical Engineering and Computational Biology 2012:4 1-15
Perspective | Published on 30 Jul 2012

Radiation-Triggered NF-κB Activation is Responsible for the Angiogenic Signaling Pathway and Neovascularization for Breast Cancer Cell Proliferation and Growth
Hui Yu, Sumathy Mohan and Mohan Natarajan
Breast Cancer: Basic and Clinical Research 2012:6 125-135
Original Research | Published on 23 Jul 2012

Dying for Good: Virus-Bacterium Biofilm Co-evolution Enhances Environmental Fitness
Hongjun Jin, Thomas C. Squier and Philip E. Long
Biochemistry Insights 2012:5 1-9
Rapid Communication | Published on 03 Jul 2012

Simple F Test Reveals Gene-Gene Interactions in Case-Control Studies
Guanjie Chen, Ao Yuan, Jie Zhou, Amy R. Bentley, Adebowale Adeyemo and Charles N. Rotimi
Bioinformatics and Biology Insights 2012:6 169-176
Short Report | Published on 02 Jul 2012

DNA Structural Properties in the Classification of Genomic Transcription Regulation Elements
Pieter Meysman, Kathleen Marchal and Kristof Engelen
Bioinformatics and Biology Insights 2012:6 155-168
Review | Published on 02 Jul 2012

Ruminant Metabolic Systems Biology: Reconstruction and Integration of Transcriptome Dynamics Underlying Functional Responses of Tissues to Nutrition and Physiological Statea
Massimo Bionaz and Juan J. Loor
Gene Regulation and Systems Biology 2012:6 109-125
Review | Published on 25 Jun 2012

An Integrated Statistical Approach to Compare Transcriptomics Data Across Experiments: A Case Study on the Identification of Candidate Target Genes of the Transcription Factor PPARα
Mohammad Ohid Ullah, Michael Müller and Guido J.E.J. Hooiveld
Bioinformatics and Biology Insights 2012:6 145-154
Methodology | Published on 19 Jun 2012

The Influence of Taxon Sampling and Tree Shape on Molecular Dating: An Empirical Example from Mammalian Mitochondrial Genomes
André E.R. Soares and Carlos G. Schrago
Bioinformatics and Biology Insights 2012:6 129-143
Original Research | Published on 31 May 2012

Binding Motifs in Bacterial Gene Promoters Modulate Transcriptional Effects of Global Regulators CRP and ArcA
Michael R. Leuze, Tatiana V. Karpinets, Mustafa H. Syed, Alexander S. Beliaev and Edward C. Uberbacher
Gene Regulation and Systems Biology 2012:6 93-107
Original Research | Published on 30 May 2012 | Video abstract

Sequence and Structure of the Tobacco Hornworm, Manduca sexta, Transhydrogenase Gene
Matthew Pelletier, Laura Leigh French, Stephen Trinidad and Kurt Vandock,
International Journal of Insect Science 2012:4 1-6
Short Report | Published on 30 May 2012

Quantification of Transcriptome Responses of the Rumen Epithelium to Butyrate Infusion using RNA-seq Technology
Ransom L. Baldwin VI, Sitao Wu, Weizhong Li, Congjun Li, Brian J. Bequette and Robert W. Li
Gene Regulation and Systems Biology 2012:6 67-80
Original Research | Published on 16 May 2012

Unique Sex-Based Approach Identifies Transcriptomic Biomarkers Associated with Non-Syndromic Craniosynostosis
Brendan D. Stamper, Sarah S. Park, Richard P. Beyer, Theo K. Bammler and Michael L. Cunningham
Gene Regulation and Systems Biology 2012:6 81-92
Original Research | Published on 16 May 2012

Challenges for Heparin Production: Artificial Synthesis or Alternative Natural Sources?
Mauro S.G. Pavão and Paulo A.S. Mourão
Glycobiology Insights 2012:3 1-6
Letter to Editor | Published on 16 May 2012 | Video abstract

Different Evolutionary Modifications as a Guide to Rewire Two-Component Systems
Beate Krueger, Torben Friedrich, Frank Förster, Jörg Bernhardt, Roy Gross and Thomas Dandekar
Bioinformatics and Biology Insights 2012:6 97-128
Original Research | Published on 03 May 2012

Transcriptome Analysis in Tardigrade Species Reveals Specific Molecular Pathways for Stress Adaptations
Frank Förster, Daniela Beisser, Markus A. Grohme, Chunguang Liang, Brahim Mali, Alexander Matthias Siegl, Julia C. Engelmann, Alexander V. Shkumatov, Elham Schokraie, Tobias Müller, Martina Schnölzer, Ralph O. Schill, Marcus Frohme and Thomas Dandekar
Bioinformatics and Biology Insights 2012:6 69-96
Original Research | Published on 23 Apr 2012